DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX3 and AT2G07687

DIOPT Version :9

Sequence 1:YP_009047271.1 Gene:COX3 / 19893540 FlyBaseID:FBgn0013676 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_178782.1 Gene:AT2G07687 / 815364 AraportID:AT2G07687 Length:265 Species:Arabidopsis thaliana


Alignment Length:264 Identity:147/264 - (55%)
Similarity:187/264 - (70%) Gaps:2/264 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTHSNHPFHLVDYSPWPLTGAIGAMTTVSGMVKWFHQYD--ISLFVLGNIITILTVYQWWRDVS 63
            |.....|.:||||.||||::|::||:.|..|.|.:.|.:.  ..|..||.|..:.|::.|||||.
plant     1 MIESQRHSYHLVDPSPWPISGSLGALATTVGGVMYMHPFQGGARLLSLGLIFILYTMFVWWRDVL 65

  Fly    64 REGTYQGLHTYAVTIGLRWGMILFILSEVLFFVSFFWAFFHSSLSPAIELGASWPPMGIISFNPF 128
            ||.|.:|.||..|.:|.|:|.||||:|||:||.:||||..||||:||:|:|..|||.||...:|:
plant    66 RESTLEGHHTKVVQLGPRYGSILFIVSEVMFFFAFFWASSHSSLAPAVEIGGIWPPKGIEVLDPW 130

  Fly   129 QIPLLNTAILLASGVTVTWAHHSLMENNHSQTTQGLFFTVLLGIYFTILQAYEYIEAPFTIADSI 193
            :||.|||.||.:||..||||||:::.....:....|..||||.:.||..|..||.:|||||:|||
plant   131 EIPFLNTPILPSSGAAVTWAHHAILAGKEKRAVYALVATVLLALVFTGFQGMEYYQAPFTISDSI 195

  Fly   194 YGSTFFMATGFHGIHVLIGTTFLLVCLLRHLNNHFSKNHHFGFEAAAWYWHFVDVVWLFLYITIY 258
            ||||||:||||||.||:|||.||::|.:|....|.:|.||.|||||||||||||||||||:::||
plant   196 YGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIY 260

  Fly   259 WWGG 262
            ||||
plant   261 WWGG 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX3YP_009047271.1 COX3 4..258 CDD:214439 140/255 (55%)
AT2G07687NP_178782.1 PLN02194 1..265 CDD:177845 147/264 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 336 1.000 Domainoid score I253
eggNOG 1 0.900 - - E1_COG1845
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 339 1.000 Inparanoid score I647
OMA 1 1.010 - - QHG62397
OrthoDB 1 1.010 - - D1304563at2759
OrthoFinder 1 1.000 - - FOG0003223
OrthoInspector 1 1.000 - - otm3328
orthoMCL 1 0.900 - - OOG6_104028
Panther 1 1.100 - - LDO PTHR11403
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2639
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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