DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX3 and cox3

DIOPT Version :10

Sequence 1:YP_009047271.1 Gene:COX3 / 19893540 FlyBaseID:FBgn0013676 Length:262 Species:Drosophila melanogaster
Sequence 2:YP_009472127.2 Gene:cox3 / 36335673 -ID:- Length:265 Species:Arabidopsis thaliana


Alignment Length:264 Identity:151/264 - (57%)
Similarity:191/264 - (72%) Gaps:2/264 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTHSNHPFHLVDYSPWPLTGAIGAMTTVSGMVKWFHQYD--ISLFVLGNIITILTVYQWWRDVS 63
            |.....|.:||||.||||::|::||:.|..|.|.:.|.:.  ..|..||.|..:.|::.|||||.
plant     1 MIESQRHSYHLVDPSPWPISGSLGALATTVGGVMYMHSFQGGARLLSLGLIFILYTMFVWWRDVL 65

  Fly    64 REGTYQGLHTYAVTIGLRWGMILFILSEVLFFVSFFWAFFHSSLSPAIELGASWPPMGIISFNPF 128
            ||.|.:|.||..|.:|||:|.||||:|||:||.:||||||||||:||:|:|..|||.||...:|:
plant    66 RESTLEGHHTKVVQLGLRYGFILFIVSEVMFFFAFFWAFFHSSLAPAVEIGGIWPPKGIEVLDPW 130

  Fly   129 QIPLLNTAILLASGVTVTWAHHSLMENNHSQTTQGLFFTVLLGIYFTILQAYEYIEAPFTIADSI 193
            :||.|||.|||:||..||||||:::.....:....|..||||.:.||..|..||.:|||||:|||
plant   131 EIPFLNTLILLSSGAAVTWAHHAILAGKEKRAVYALVATVLLALVFTGFQGMEYYQAPFTISDSI 195

  Fly   194 YGSTFFMATGFHGIHVLIGTTFLLVCLLRHLNNHFSKNHHFGFEAAAWYWHFVDVVWLFLYITIY 258
            ||||||:||||||.||:|||.||::|.:|....|.:|.||.|||||||||||||||||||:::||
plant   196 YGSTFFLATGFHGFHVIIGTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVWLFLFVSIY 260

  Fly   259 WWGG 262
            ||||
plant   261 WWGG 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX3YP_009047271.1 COX3 4..258 CDD:214439 144/255 (56%)
cox3YP_009472127.2 Heme_Cu_Oxidase_III_like 1..265 CDD:444752 151/264 (57%)

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