DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX2 and COX2

DIOPT Version :10

Sequence 1:YP_009047268.1 Gene:COX2 / 19893535 FlyBaseID:FBgn0013675 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_009326.1 Gene:COX2 / 854622 SGDID:S000007281 Length:251 Species:Saccharomyces cerevisiae


Alignment Length:225 Identity:112/225 - (49%)
Similarity:161/225 - (71%) Gaps:11/225 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QDSASPLMEQLIFFHDHALLILVMITVLVGYLMFMLFF----NNYVNRFLLHGQLIEMIWTILPA 70
            ||||:|..|.::..||:.:..|::|..||.::::.:..    |....:::.|||.||:||||.||
Yeast    26 QDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYIKHGQTIEVIWTIFPA 90

  Fly    71 IILLFIALPSLRLLYLLDEINEPSVTLKSIGHQWYWSYEYSDFNN-----IEFDSYMIPTNELMT 130
            :|||.||.||..||||.||:..|::|:|:||:||||.||||||.|     :||:||:|| :||:.
Yeast    91 VILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGETVEFESYVIP-DELLE 154

  Fly   131 DG-FRLLDVDNRVVLPMNSQIRILVTAADVIHSWTVPALGVKVDGTPGRLNQTNFFINRPGLFYG 194
            :| .||||.|..:|:|:::.||.:||||||||.:.:|:||:|||.|||||||.:..|.|.|:|||
Yeast   155 EGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYG 219

  Fly   195 QCSEICGANHSFMPIVIESVPVNYFIKWIS 224
            .|||:||..|:.|||.||:|.:..|::|::
Yeast   220 ACSELCGTGHANMPIKIEAVSLPKFLEWLN 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX2YP_009047268.1 COX2 1..227 CDD:214438 112/225 (50%)
COX2NP_009326.1 COX2 24..249 CDD:214438 112/225 (50%)

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