DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX2 and AT2G07695

DIOPT Version :10

Sequence 1:YP_009047268.1 Gene:COX2 / 19893535 FlyBaseID:FBgn0013675 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_178786.1 Gene:AT2G07695 / 815371 AraportID:AT2G07695 Length:291 Species:Arabidopsis thaliana


Alignment Length:204 Identity:47/204 - (23%)
Similarity:75/204 - (36%) Gaps:74/204 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WANLGLQDSASPLMEQLIFFHDHALLILVMITVLVGYLMFMLFFN-----NYVNRFLLHGQLIEM 63
            | .||.||:|:|:|:.:|..|......|::|.|.|.:::....::     |.:.:.::||..||:
plant    20 W-QLGSQDAATPIMQGIIDLHHDIFFFLILILVFVLWILVRALWHFHYKKNAIPQRIVHGTTIEI 83

  Fly    64 IWTILPAIILLFIALPSLRL--------------------------------------------- 83
            :.||.|..|.:||..||..|                                             
plant    84 LRTIFPCFISIFIVEPSFALALDDAAEALFPNTAPTPSNTSSSEDSFGLSVLSEPWPITRNLGLE 148

  Fly    84 ------LYLLDEINEPSVTLKSIGHQWYWSYEYSDFNNIEFDSYMIPTNELMTDGFRLLDVDNRV 142
                  :.||:..|.|.:..|..|.  ||.         |....:...:| ..:.:||||.:|| 
plant   149 SSICNRIRLLEAANSPFLLGKEKGQ--YWG---------EIQECLYNVSE-QREYYRLLDFENR- 200

  Fly   143 VLPMNSQIR 151
                :.|||
plant   201 ----DLQIR 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX2YP_009047268.1 COX2 1..227 CDD:214438 47/204 (23%)
AT2G07695NP_178786.1 COX2_TM 16..101 CDD:397083 26/81 (32%)

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