DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment COX1 and AI5_ALPHA

DIOPT Version :10

Sequence 1:YP_009047267.1 Gene:COX1 / 19893533 FlyBaseID:FBgn0013674 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_009306.1 Gene:AI5_ALPHA / 854597 SGDID:S000007265 Length:630 Species:Saccharomyces cerevisiae


Alignment Length:323 Identity:214/323 - (66%)
Similarity:271/323 - (83%) Gaps:3/323 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RQWLFSTNHKDIGTLYFIFGAWAGMVGTSLSILIRAELGHPGA--LIGDDQIYNVIVTAHAFIMI 64
            ::||:|||.|||..|||:...::||.||::|::||.||..||:  |.|:.|::||:|..||.:||
Yeast     3 QRWLYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMI 67

  Fly    65 FFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPALSLLLVSSMVENGAGTGWTVYPP 129
            ||:|||.:||||||:|:|||:||.|.||||:||::||:||..|..|:.|::||:|||||||||||
Yeast    68 FFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPP 132

  Fly   130 LSAGIAHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGISLDRMPLFVWSVVITALLLL 194
            ||:..||.|.|||||||:|||..|||:|||:|||.|.:|||:.|:::.::||||||:.|||.|||
Yeast   133 LSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLL 197

  Fly   195 LSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQE 259
            ||||||:..|||||.|||.|||||:.:||||||||:|||||||||||||||:||||:|||::|..
Yeast   198 LSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVSTY 262

  Fly   260 SGKKETFGSLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWL 322
            | ||..||.:.|:|||.:||||||:||:|||:.||:|.||||||||||||||:||||||||||
Yeast   263 S-KKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWL 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX1YP_009047267.1 COX1 1..511 CDD:177210 214/323 (66%)
AI5_ALPHANP_009306.1 Heme_Cu_Oxidase_I 9..>324 CDD:469701 209/315 (66%)
LAGLIDADG_2 424..601 CDD:427174
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.