DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX1 and COX1

DIOPT Version :9

Sequence 1:YP_009047267.1 Gene:COX1 / 19893533 FlyBaseID:FBgn0013674 Length:511 Species:Drosophila melanogaster
Sequence 2:YP_003024028.1 Gene:COX1 / 4512 HGNCID:7419 Length:513 Species:Homo sapiens


Alignment Length:503 Identity:385/503 - (76%)
Similarity:448/503 - (89%) Gaps:0/503 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QWLFSTNHKDIGTLYFIFGAWAGMVGTSLSILIRAELGHPGALIGDDQIYNVIVTAHAFIMIFFM 67
            :||||||||||||||.:||||||::||:||:|||||||.||.|:|:|.|||||||||||:|||||
Human     5 RWLFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFM 69

  Fly    68 VMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPALSLLLVSSMVENGAGTGWTVYPPLSA 132
            |||||||||||||||||:||||||||||||||||||||:|.|||.|:|||.||||||||||||:.
Human    70 VMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAG 134

  Fly   133 GIAHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGISLDRMPLFVWSVVITALLLLLSL 197
            ..:|.||||||.||||||||:||||||:|||||:|||:...::..:.|||||||:|||:||||||
Human   135 NYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSL 199

  Fly   198 PVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGK 262
            ||||..||||||||||||:|||||||||||||||||||||||||||||||||||||||::..|||
Human   200 PVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGK 264

  Fly   263 KETFGSLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHG 327
            ||.||.:||::||::||.|||||||||||||||||||||||||||||||:|||:|:|||||||||
Human   265 KEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHG 329

  Fly   328 TQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAVFAIMAGFI 392
            :.:.:|.|:||||||:||||||||||:||||||:||:||||||||||||||||||||||||.|||
Human   330 SNMKWSAAVLWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFI 394

  Fly   393 HWYPLFTGLTLNNKWLKSHFIIMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYTTWNIVSTIGST 457
            ||:|||:|.||:..:.|.||.||||||||||||||||||:||||||||||||||||||:|::||.
Human   395 HWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSVGSF 459

  Fly   458 ISLLGILFFFFIIWESLVSQRQVIYPIQLNSSIEWYQNTPPAEHSYSE 505
            |||..::...|:|||:..|:|:|:...:.:.::||....||..|::.|
Human   460 ISLTAVMLMIFMIWEAFASKRKVLMVEEPSMNLEWLYGCPPPYHTFEE 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX1YP_009047267.1 COX1 1..511 CDD:177210 385/503 (77%)
COX1YP_003024028.1 COX1 5..507 CDD:177210 384/501 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160351
Domainoid 1 1.000 771 1.000 Domainoid score I81
eggNOG 1 0.900 - - E1_COG0843
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 829 1.000 Inparanoid score I463
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61018
OrthoDB 1 1.010 - - D319716at33208
OrthoFinder 1 1.000 - - FOG0002409
OrthoInspector 1 1.000 - - oto89658
orthoMCL 1 0.900 - - OOG6_102770
Panther 1 1.100 - - LDO PTHR10422
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R244
SonicParanoid 1 1.000 - - X1600
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.800

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