Protein Alignment COX1 and cox1

DIOPT Version :10

• Sequence 1: YP_009047267.1
• Gene: COX1 / 19893533
• FlyBaseID: FBgn0013674
• Length: 511
• Species: Drosophila melanogaster
• Sequence 2: YP_009472108.1
• Gene: cox1 / 36335686
• -ID: -
• Length: 527
• Species: Arabidopsis thaliana
• Alignment Length: 515
• Identity: 354/515 - (68%)
• Similarity: 425/515 - (82%)
• Gaps: 9/515 - (1%)

  Fly     3 QWLFSTNHKDIGTLYFIFGAWAGMVGTSLSILIRAELGHPGALI--GDDQIYNVIVTAHAFIMIF 65
            :|||||||||||||||||||.||::||..|:|||.||..||..|  |:.|:|||::|||||:|||
plant     6 RWLFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIF 70

  Fly    66 FMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPALSLLLVSSMVENGAGTGWTVYPPL 130
            |||||.||||||||.||:::|||||||||:||:|||||||:|.|||.|::||.|:||||||||||
plant    71 FMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPL 135

  Fly   131 SAGIAHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGISLDRMPLFVWSVVITALLLLL 195
            |...:|.|.:||||||||||:|:|||||::|||||:.|||..|:::.|:|||||||::||.||||
plant   136 SGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLL 200

  Fly   196 SLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQES 260
            |||||||||||||||||.||:||||||||||||||||||||||||||||||||||:||||:|..|
plant   201 SLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFS 265

  Fly   261 GKKETFGSLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATL 325
            | |..||.|||:|||::||:|||:||||||||||:|||||||||:||||||||||||||||:||:
plant   266 G-KPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATM 329

  Fly   326 HGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAVFAIMAG 390
            .|..:.|...:|:|:||:||||:|||||:|||||.:||.||||||||||||||||||||||:.||
plant   330 WGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 394

  Fly   391 FIHWYPLFTGLTLNNKWLKSHFIIMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYTTWNIVSTIG 455
            |.:|.....|.|......:.||.|.|.||||||||.|||||:|||||..||||||..||.:|:.|
plant   395 FYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNALSSFG 459

  Fly   456 STISLLGILFFFFIIWESLVS---QRQVIYP--IQLNS-SIEWYQNTPPAEHSYSELPLL 509
            |.||::||..||.::..:|.|   :|....|  ::||| ::||...:|||.|::.|||.:
plant   460 SYISVVGICCFFVVVTITLSSGNNKRCAPSPWALELNSTTLEWMVQSPPAFHTFGELPAI 519

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
COX1	YP_009047267.1	COX1	1..511	CDD:177210	354/515 (69%)
cox1	YP_009472108.1	Cyt_c_Oxidase_I	11..504	CDD:238833	343/493 (70%)