Protein Alignment COX1 and COX1

DIOPT Version :9

• Sequence 1: YP_009047267.1
• Gene: COX1 / 19893533
• FlyBaseID: FBgn0013674
• Length: 511
• Species: Drosophila melanogaster
• Sequence 2: NP_006961.1
• Gene: COX1 / 2565700
• Length: 525
• Species: Caenorhabditis elegans
• Alignment Length: 504
• Identity: 325/504 - (64%)
• Similarity: 404/504 - (80%)
• Gaps: 2/504 - (0%)

  Fly     4 WLFSTNHKDIGTLYFIFGAWAGMVGTSLSILIRAELGHPGALIGDDQIYNVIVTAHAFIMIFFMV 68
            ||.|:|||||||||||||.|:||||||.|:|||.||..||..:.:.|:||.::||||.:||||||
 Worm    14 WLESSNHKDIGTLYFIFGLWSGMVGTSFSLLIRLELAKPGFFLSNGQLYNSVITAHAILMIFFMV 78

  Fly    69 MPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPALSLLLVSSMVENGAGTGWTVYPPLSAG 133
            ||.|||||||||:|||||||||:|||:||:||||||.::.|:|.:..|:.|.||.||||||||.
 Worm    79 MPTMIGGFGNWLLPLMLGAPDMSFPRLNNLSFWLLPTSMLLILDACFVDMGCGTSWTVYPPLST- 142

  Fly   134 IAHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGISLDRMPLFVWSVVITALLLLLSLP 198
            :.|.|:||||||||||.||:|||||.:||:.|..|:||:.|||:.|.||||:|.:|..||:||||
 Worm   143 MGHPGSSVDLAIFSLHAAGLSSILGGINFMCTTKNLRSSSISLEHMTLFVWTVFVTVFLLVLSLP 207

  Fly   199 VLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGKK 263
            ||||||||||||||||||||||:.||:|::|||||||||||||||||||.||::|......:|||
 Worm   208 VLAGAITMLLTDRNLNTSFFDPSTGGNPLIYQHLFWFFGHPEVYILILPAFGIVSQSTLYLTGKK 272

  Fly   264 ETFGSLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGT 328
            |.||:|||:||:|:|||:|.:||||||:|||||:|:||||::|||:||||||:|:|||||||.|.
 Worm   273 EVFGALGMVYAILSIGLIGCVVWAHHMYTVGMDLDSRAYFSAATMVIAVPTGVKVFSWLATLFGM 337

  Fly   329 QLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAVFAIMAGFIH 393
            ::.::|.:||.|||:||||:||||||||:|||:|||||||||||:|||||||:||||.|..|...
 Worm   338 KMVFNPLLLWVLGFIFLFTLGGLTGVVLSNSSLDIILHDTYYVVSHFHYVLSLGAVFGIFTGVTL 402

  Fly   394 WYPLFTGLTLNNKWLKSHFIIMFIGVNLTFFPQHFLGLAGMPRRYSDYPDAYTTWNIVSTIGSTI 458
            |:...||..|:...:.:.||::||||||||||.||.||.|.||:|.||||.|:.|||:::.||.|
 Worm   403 WWSFITGYVLDKLMMSAVFILLFIGVNLTFFPLHFAGLHGFPRKYLDYPDVYSVWNIIASYGSII 467

  Fly   459 SLLGILFFFFIIWESLVSQRQVIYPIQLNSSIEWYQNTPPAEHSY-SEL 506
            |..|:..|.:::.||..|.|.||.....|||.|:..:.....||| ||:
 Worm   468 STAGLFLFIYVLLESFFSYRLVISDYYSNSSPEYCMSNYVFGHSYQSEI 516

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
COX1	YP_009047267.1	COX1	1..511	CDD:177210	325/504 (64%)
COX1	NP_006961.1	COX1	8..515	CDD:177148	323/501 (64%)
		COX1	22..467	CDD:278541	299/444 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	652	1.000	Domainoid score	I71
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	691	1.000	Inparanoid score	I356
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG61018
OrthoDB	1	1.010	-	-		D319716at33208
OrthoFinder	1	1.000	-	-		FOG0002409
OrthoInspector	1	1.000	-	-		oto17880
orthoMCL	1	0.900	-	-		OOG6_102770
Panther	1	1.100	-	-	LDO	PTHR10422
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R244
SonicParanoid	1	1.000	-	-		X1600
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	13	13.010