DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND2 and AT2G07689

DIOPT Version :10

Sequence 1:YP_009047266.1 Gene:ND2 / 19893529 FlyBaseID:FBgn0013680 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_671807.1 Gene:AT2G07689 / 815366 AraportID:AT2G07689 Length:214 Species:Arabidopsis thaliana


Alignment Length:191 Identity:43/191 - (22%)
Similarity:85/191 - (44%) Gaps:23/191 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 WFPNMMEGLTWMNALMLMTWQKIAPLMLISY------------LNIKYLLLISVILSVIIGAIGG 165
            |.|::.||    :...:..:..|||.:.||.            ..::.:.....|.|:|:||:..
plant     2 WAPDIYEG----SPTPVTAFLSIAPKISISANILRVSIYGSYGATLQQIFFFCSIASMILGALAA 62

  Fly   166 LNQTSLRKLMAFSSINHLGWMLSSLMIS--ESI--WLIYFFFYSFL---SFVLTFMFNIFKLFHL 223
            :.||.:::.:|.|||.|:|::.:.....  |.|  .||..|.|:.:   :|.:.......::.::
plant    63 MAQTKVKRPLAHSSIGHVGYIRTGFSCGTIEGIQSLLIGIFIYALMTMDAFAIVSALRQTRVKYI 127

  Fly   224 NQLFSWFVNSKILKFTLFMNFLSLGGLPPFLGFLPKWLVIQQLTLCNQYFMLTLMMMSTLI 284
            ..|.:....:.|...|..:...|..|:||..||..|:.:......|..||:..:.:::::|
plant   128 ADLGALAKTNPISAITFSITMFSYAGIPPLAGFCSKFYLFFAALGCGAYFLAPVGVVTSVI 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND2YP_009047266.1 ND2 1..340 CDD:214442 43/191 (23%)
AT2G07689NP_671807.1 Proton_antipo_M <1..190 CDD:476862 43/191 (23%)

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