Protein Alignment ND2 and ndhB

DIOPT Version :10

• Sequence 1: YP_009047266.1
• Gene: ND2 / 19893529
• FlyBaseID: FBgn0013680
• Length: 341
• Species: Drosophila melanogaster
• Sequence 2: NP_051119.2
• Gene: ndhB / 4042815
• -ID: -
• Length: 512
• Species: Arabidopsis thaliana
• Alignment Length: 380
• Identity: 93/380 - (24%)
• Similarity: 171/380 - (45%)
• Gaps: 69/380 - (18%)

  Fly     8 ILFITIMIIGTLITVTSNSWLGAWMGLE-INLLSFIPLLSDNNNLMSTEASLKYFLTQVLASTVL 71
            :|||....:|.:....:|..:..::..| .:|.|::.......::.|.||::||.|....:|::|
plant   130 LLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDIRSNEATMKYLLMGGASSSIL 194

  Fly    72 L--FSSIL------LMLKNNMNNEIN-ESFTSMIIMSALL-------LKSGAAPFHFWFPNMMEG 120
            :  ||.:.      :.|:..:|..|| :.:.|..|..||:       .|...||.|.|.|::.||
plant   195 VHGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEG 259

  Fly   121 LTWMNALMLMTWQKIA-----------PLMLISYLNIKYLLL-ISVILSVIIGAIGGLNQTSLRK 173
            ........|....|:|           |....|  |..:||| |..|||:|.|.:..:.|||:::
plant   260 SPTPVVAFLSVTSKVAASASATRIFDIPFYFSS--NEWHLLLEILAILSMIFGNLIAITQTSMKR 322

  Fly   174 LMAFSSINHLGWMLSSLMISES-----IWLIYFFFYSFL---SFVLTFMFNI-FKLFHLNQLFSW 229
            ::|:|||..:|:::..:::.:|     ..:.|..||..:   :|....:|.: ....::......
plant   323 MLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYIAMNLGTFACIILFGLRTGTDNIRDYAGL 387

  Fly   230 FVNSKILKFTLFMNFLSLGGLPPFLGFLPK----WLVIQQLTLCNQYFMLTLMMMSTLITLFFYL 290
            :.....|..:|.:..||||||||..||..|    |...|    ...||::::.::::::::::||
plant   388 YTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQ----AGLYFLVSIGLLTSVLSIYYYL 448

  Fly   291 RIC----------YSAFMMNY----FENNWIMKMNMNSINYNMYMIMTFFSIFGL 331
            :|.          .:..|.||    ..:|       |||..:|.:.:...:|.|:
plant   449 KIIKLLMTGRNQEITPHMRNYRISPLRSN-------NSIELSMIVCVIASTIPGI 496

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ND2	YP_009047266.1	ND2	1..340	CDD:214442	93/380 (24%)
ndhB	NP_051119.2	ndhB	17..510	CDD:176990	93/380 (24%)