Sequence 1: | NP_035413.1 | Gene: | Rp1 / 19888 | MGIID: | 1341105 | Length: | 2095 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651636.1 | Gene: | CG1647 / 43401 | FlyBaseID: | FBgn0039602 | Length: | 1222 | Species: | Drosophila melanogaster |
Alignment Length: | 1441 | Identity: | 255/1441 - (17%) |
---|---|---|---|
Similarity: | 480/1441 - (33%) | Gaps: | 438/1441 - (30%) |
- Green bases have known domain annotations that are detailed below.
Mouse 743 NKLNTF---------QNPKTQKLLAKRKSRPRKIVSTERLRKQE------IGQEDKILLHSDSKL 792
Mouse 793 CESHLEKQSLFHVFNILEEDQKVLHR----PPFQVEKVARNLKGMAKKSLVPKVNDLHIMLRNQK 853
Mouse 854 KQMGVKLKSGAEVSEQHVTTRADPLASLKKPDFPEGIPHHSGKSYVKRWLQNINSYPDFEHRKSG 918
Mouse 919 P--LCQNRSDVVNYNRNGFLGNNLHTTSSKGNGFLMESNKSKTKNDNWSGNTNQETGKSLVAKDN 981
Mouse 982 GEELNKHHCESQNGSLYDSYLVSLHDNCTLSQTTINEPSTKSHLSIEKSRPEVKLVYQEMNFATK 1046
Mouse 1047 RQSIEVAIQVDTMGENVLKDYLPALLLRHLEA---FVPNNQKHQNGISQIPGSLAEVVFPSVIDN 1108
Mouse 1109 SSTNLLLAWLLVLNLKRTMNSFCQSDAHKMTNRPSETA----ALLEVLKHVAITEEADDLKAAVA 1169
Mouse 1170 NLMESTKTCSGSSGREQDMLPVNCTASSLHSVDECNENGSAQKTLLDEGYSVMGDCTSEMVSKSC 1234
Mouse 1235 NSSCEMHMVSKTNPPK-QVDDQSDGLLTSNSCTVSQRSTGACFLTDGVYSHEACAQKEGVYEGAC 1298
Mouse 1299 LSDETHIPIRDCHTIHSVHSKENKCTDDLE-----STEELKTVDKVPKGLSILADSMYKN-DSNV 1357
Mouse 1358 STFQNVNKLSSQRTLLSKTYLDSDKDYSPLEEFQNCPRKKIVNKKKSISSDKEESRTSEEPRS-I 1421
Mouse 1422 TNSMTSSERN-AISE--LESFEELESQDTSIFNM----NV--------------RAEKKSTKETM 1465
Mouse 1466 QK----QSEARMSSELINVSGRKIIEQERRNT------AILETTARGQVT----PPSLAFC---Y 1513
Mouse 1514 DSNKNTEKEISEGETKMRVKKMVDSMENESYSESSLNFKKH---------HRSPGTLDWSDYGSD 1569
Mouse 1570 SESGYPCKASSNSHNDDSGQEKEPTRGIVKR-AIEKLYGKAEIIKPPFFHGSIHKSQVCPYNSVE 1633
Mouse 1634 VQCAKKTNFYESECQSLVSSEQVSRSSLIFQEFPQVDANGMGDSFGDSSIENVTKSSAHDRVFTE 1698
Mouse 1699 KENGKLIDNGKWLLRENHLWRVSSDNPGMYGNADTTSVDTLI--DKNSIEVPYSHFGELAPGPTM 1761
Mouse 1762 AELSSSEIEEMTQPLEVKCNYFNFPHGSDSEPFGEDFPDA--QNKTCPKEKIPNH-HTEEKGN-- 1821
Mouse 1822 -----YPSERL---CTSV---TQAFVSAGNKVHP--VCSDAIKTQPLPGSNITHGALQEGDSLDK 1873
Mouse 1874 LYALCGQHCPILTVIIQ-PVNEESRGFA----------YRKDSDIENSLDFQLWMKIYPFMPQSK 1927
Mouse 1928 KHVFRSDGRNVSVGEEFAGNVIGDLCDQLYFKSMIDLVDQRANSLGKEINLKKFQLYLKKSFSDP 1992
Mouse 1993 LSTSLLVVENRNSVSLSPSSWTDNFKSIDENNNFLN-----------RLP----NSSKNPNQVVR 2042
Mouse 2043 ENTNFQFHLEL 2053 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rp1 | NP_035413.1 | DCX | 35..110 | CDD:176357 | |
DCX | 157..232 | CDD:176357 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 358..379 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 643..688 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 863..887 | 5/23 (22%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1400..1430 | 5/30 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1572..1595 | 4/22 (18%) | |||
CG1647 | NP_651636.1 | zf-AD | 19..99 | CDD:285071 | 5/21 (24%) |
C2H2 Zn finger | 203..224 | CDD:275368 | 2/22 (9%) | ||
C2H2 Zn finger | 233..253 | CDD:275368 | 4/20 (20%) | ||
C2H2 Zn finger | 262..282 | CDD:275368 | 5/23 (22%) | ||
C2H2 Zn finger | 297..314 | CDD:275368 | 3/16 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1181 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |