Sequence 1: | NP_035413.1 | Gene: | Rp1 / 19888 | MGIID: | 1341105 | Length: | 2095 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_610972.2 | Gene: | Su(var)2-HP2 / 36621 | FlyBaseID: | FBgn0026427 | Length: | 3257 | Species: | Drosophila melanogaster |
Alignment Length: | 2136 | Identity: | 392/2136 - (18%) |
---|---|---|---|
Similarity: | 717/2136 - (33%) | Gaps: | 564/2136 - (26%) |
- Green bases have known domain annotations that are detailed below.
Mouse 2 SDTPSTSFSMIHLTS--EGQVP----SPRHSNITHPVVAKRISFYKSGDPQFGGVRVVVNPRSFK 60
Mouse 61 TFDALLDSLSRKVPLPFGVRNISTPRGRHSITRLEELEDGKSYVCSHNKKVLPVDLDKARRRPRP 125
Mouse 126 WLSSRSISTHVQLCPATANMSTMAPGMLRAPRRLVVFRNGDPKNKHVVLLSRRITQSFEAFLQYL 190
Mouse 191 TQVMQCPVAKLYATDGRKVPSLQAVILSSGAVVAAGREPFKPGNYDIQKYLLPAKLPGISHRVHQ 255
Mouse 256 KGKAKIE-KRKMSTHMPSDLRPQ-------TDSLISEKTYDCFSDFSVAP--------------E 298
Mouse 299 NYLALETHES-QSLSTYPSEDDVEKSIVFNQDGTMTVVMKVRFKIKEEETVKWTTTVNRAGLSNN 362
Mouse 363 DEKNKKSSYPGKTDYGPSSLKLEACSLPEDIVDTTQQGSLTEEENTQMTEQQALSCSSASWENAS 427
Mouse 428 METDIQESQKQVKHFYRPPTPGPRRMRQKKSVIG--------TVTVVSETEVQEKQ--------- 475
Mouse 476 ------------FSYSEE------RKGGEKSEYHMFTHSCSKMSSVSNKLVQIGSDNEMESALE- 521
Mouse 522 --RTRESGSLKSQAINAGAIEITSQKVLKMCHNNALPSTAPENSVVEEGTDNSAVSGTATIKHFR 584
Mouse 585 TCGNANDSFSSITADSTPTSVNNYSNDRNISELPSVGS------PVLTMRLVNEFAHCGLTEKPE 643
Mouse 644 NRKKV--LSSSASKK--KKKKSQQRMITSNDKKKVIET-----------KGPPNIAGKIPRAGTT 693
Mouse 694 AQERLLQESDCPDKGGRVCEQGLNISPMA-----------IESNNFFPKSNPTFSKNFYK----- 742
Mouse 743 -NKLNTFQNPKTQKL-LAKRKSRPRKIVSTERLRKQEI------GQEDKILLHSDSKLCESHLEK 799
Mouse 800 QSLFHVFNILEEDQK----VLHRPPFQVEKVARNL-KGMAKKSLVPKVNDLHIMLRNQKKQMGVK 859
Mouse 860 LKSGAEVSEQHV---------------------TTRADPL---------------------ASLK 882
Mouse 883 KPDFPEGIPHHSGKSYVKRWLQNINSYPDFEHRKS-----------GPL----CQNRSDVVNYNR 932
Mouse 933 NGFLGNNLHTT---SSKGNGFLMESNKSKTKN---------DNWS--GNTN---QETGKSLVAKD 980
Mouse 981 NGEELN--KHHCESQN---GSLYDSYLVSLHDNCTLSQTTINEPSTKSHLSIEKSRPEVKLVYQE 1040
Mouse 1041 MNFATKRQSIEVAIQVD---------TMGENVLKDYL--------PAL-------LLRHLEAFVP 1081
Mouse 1082 NNQKH------QNGISQIPGSLAE--VVFPSVIDNSSTNLLLAWLLVLNLKRTMNSFCQSDAHKM 1138
Mouse 1139 TNRPSETAALLEVLKHVAITEEADDLKAAVANLMESTKTCSGSSGREQDMLPVNCTASSLHSVDE 1203
Mouse 1204 CNENGSAQKTLLDEGYSVMGDCTSEMVSKSCNSSCEMHMVSKTNPPKQVDDQSDGLLTSNSCTVS 1268
Mouse 1269 QRSTG-ACFLTDGVYSHEACAQKEGVYEGACLSDETHIPIRDCHTIHSVHSKENKCTDDLESTEE 1332
Mouse 1333 LKTVDKVP---KGLSILADSMYKNDSNVSTFQ--NVNKLSSQRTLLSKTYL-DSDKDYSPLEEFQ 1391
Mouse 1392 NCPRKKIVNKKKSISSDKEES--RTSEEPRSI-TNSMTSSERNAISELESFEELESQDTSIFNMN 1453
Mouse 1454 VRAEKKSTKETMQKQSEARMSSELIN----------------VSGRKIIEQERR----------- 1491
Mouse 1492 NTAILETTARGQVTPPSLAFCYDSNKNTEKEISEGETKMRVKKMVDSMENESYSESSLNFKKHHR 1556
Mouse 1557 SPGTLDWSDYGSDSE--SGYPCKASSNSHNDDSGQEKEPTRGIVKRAIEK-LYGKAEIIKPPFFH 1618
Mouse 1619 GSIHKSQVCPYNSVEVQCAKKTNFYESECQSLVSSEQVSRSSLIFQE-------FPQVDANGMGD 1676
Mouse 1677 SFGDSSIENVTKSSAHDRVFTEKENGKLI--DNGKWLLRENHLWRVSSDNPGMYGNADTTSVDTL 1739
Mouse 1740 IDKN-SIEVPYSHFGELAPGPTMAELSSSEIEEMTQPLEVKCNYFNFPHGSDSEPFGEDFPDAQN 1803
Mouse 1804 KTCPKEKIPNHHTE----EKGNYPSERLCTSVTQAFVSAGNKVHPVCS--DAIKTQ 1853 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rp1 | NP_035413.1 | DCX | 35..110 | CDD:176357 | 13/74 (18%) |
DCX | 157..232 | CDD:176357 | 12/74 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 358..379 | 5/20 (25%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 643..688 | 9/59 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 863..887 | 6/65 (9%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1400..1430 | 3/32 (9%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1572..1595 | 6/22 (27%) | |||
Su(var)2-HP2 | NP_610972.2 | MDN1 | <596..845 | CDD:227596 | 51/281 (18%) |
PTZ00449 | <739..1091 | CDD:185628 | 72/406 (18%) | ||
PTZ00108 | <1132..1374 | CDD:240271 | 45/248 (18%) | ||
PTZ00121 | <1720..>2291 | CDD:173412 | 96/489 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1181 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |