Sequence 1: | NP_035413.1 | Gene: | Rp1 / 19888 | MGIID: | 1341105 | Length: | 2095 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261317.1 | Gene: | zormin / 2769001 | FlyBaseID: | FBgn0052311 | Length: | 3664 | Species: | Drosophila melanogaster |
Alignment Length: | 2369 | Identity: | 403/2369 - (17%) |
---|---|---|---|
Similarity: | 740/2369 - (31%) | Gaps: | 894/2369 - (37%) |
- Green bases have known domain annotations that are detailed below.
Mouse 9 FSMIHLTSEGQVPSPRHSNIT-----HPVV---AKRISFYKSGDPQF----------GGVRVVVN 55
Mouse 56 PRS----------FKT--------------------FDALLDSLSR--------KVPLPFG---- 78
Mouse 79 -----VRNISTPRGRHSITRLEELEDGKSYVCSHNKKVL---PVDLDK-------ARRRPRP--- 125
Mouse 126 WL----------------SSRSISTHVQL--------------------C-----------PATA 143
Mouse 144 NMSTMAPGMLRAPRRLVVFR--------------NGDPKNKHVVLLSRRITQSFEAFLQYLTQVM 194
Mouse 195 QC-PVAKLYATDGRKVPSLQ----AVILSSGAVVAAGREPFKPGNYDIQKYLLPAKLPGISHRVH 254
Mouse 255 QKGKAKIEKRKMSTHMPSDLRPQTDSLISEKTYDCFSDFSVA------PENYLALETHESQSLST 313
Mouse 314 YPSEDDVEKSIVFNQDGTMTVVMKV-------RFKIKEEETVKWTTTVNRAGLSNNDEKNKKSSY 371
Mouse 372 P---GKTDYGPSS-------LKLEACSLPEDIVDTTQ-----------------QGS----LTEE 405
Mouse 406 ENTQMTEQQALSCSSASWENASM-ETDIQESQKQVKHFYRPPTPGPRRMRQ-KKSVI---GTVTV 465
Mouse 466 VSE--TEVQEKQFSYSEERKGGEKSEYHMFTHSCSKMSSVSNKLVQIGSDNEMESALERTRESGS 528
Mouse 529 LKSQAINAGAIEITSQKVLKMCH-NNAL--------PSTAPENSVVEEGTDNSAVSGTATIKHFR 584
Mouse 585 TCGNANDSFSSITADSTPTSVNNYSNDRNISELPSVGSPVLTMRLVNEFAHCGLTEKPENRKKVL 649
Mouse 650 SSSASKKKKKKSQQRMITSN---------DKKKVIE-----TKGPPNIAGKIPRAGTTAQERLLQ 700
Mouse 701 ESDCPDKGGRVCEQGLNISPMAIESNNFFPKSNPTFSKNFYKNKLNTFQNPKTQKLLAKRKSRPR 765
Mouse 766 KIVSTERLRKQEIGQEDKILLHSDSKLCESHLEKQSLFHVFNILEEDQKVLHRPPFQVEKVARNL 830
Mouse 831 KGMAKKSLVPKVNDLHIMLRNQKKQMGVKLKSGAEVSEQHVTTRADPLA--SLKKPDFPEGIPHH 893
Mouse 894 SGKSYVKRWLQNINSYPDFEHRKSGPLCQNRSDVVNYNRNGFLGNNLHTTSSKGNGFLMESNKSK 958
Mouse 959 TKNDNWSGNTNQETGKSLVAK----DNGEELNKHHCESQNGSLYDSYLVSLHDNCTLSQTTINEP 1019
Mouse 1020 STK---SHL---SIEKSRPEVKLVYQEMNFA-----TKRQSIEVAIQVDTMGENVLKDYL--PAL 1071
Mouse 1072 LLRH-LEAFVPNNQKHQNGISQIPGSLAEVVFPSVIDNSS---------TNLLLAWLLVLNLKRT 1126
Mouse 1127 MNSFCQSDAHKMTNRPS---------------ETAALLEVLKHVAITEEADDLKAAVANLMESTK 1176
Mouse 1177 TCSGSSGREQ-----------DMLPVNCTASSL----HSVDECNENGSAQKTLLDEGY-----SV 1221
Mouse 1222 MGDCTSEMVSKSCNSSCEMHMVSKTNPPKQVDDQSDGLLTSNSCTVSQRSTGACFLTDGVYSHEA 1286
Mouse 1287 CAQKEGVYEGACLSDETHIPIRDCHTIHSVHSKENKCTDDLESTEELKTVDKVPKGLSILADSMY 1351
Mouse 1352 KNDSNVSTFQNVNKLSSQRTLLSKTYLD---SDKDYS-----PL-EEFQNCPRKKIVNKKKSISS 1407
Mouse 1408 DKEESRTSEEPRSITNSMTSSERNAISELESFEELESQDTSIFN------MNVRAEKKSTKETMQ 1466
Mouse 1467 KQSEARMSSELINVSGRKII-----EQERRNTAILE----------TTARGQVTPPSLAFCYDSN 1516
Mouse 1517 KNTEKEISEGETKMRVKKMVDSMENESYSESSLNFKKHHRSPGTLDWSDYGSDSESGYPCKASSN 1581
Mouse 1582 SHNDDSGQEKEPTRGI-----VKRAIEKLYGKAEIIKPPFFHGSIHKSQVCPYNSVEVQCAKKTN 1641
Mouse 1642 FYESECQSLVSSEQVSRSSLIFQE--------FPQVDANGMGDSFGDSSIENVTKSSAHDRVFTE 1698
Mouse 1699 KEN-GKLIDNGKWLLRENHLWRVSSDNPGMYGNADTTSVDTLIDKNSIEVPYSHFGELAPGPTMA 1762
Mouse 1763 --ELSSSEIEEMTQPLEV-----KC-------NYFNFPHGSDSEPFGEDFPDAQNKTCPKEKIPN 1813
Mouse 1814 HHTEEKGNYPSERLCTSVTQAFVSAGNKVHPVCSDAIKTQPL---PGSNITHGALQEGDSLDKLY 1875
Mouse 1876 ALCGQHCPILTVIIQPVNEESRGFAYRKDSDIENSLDFQLWMKIYPFMPQ---SKKHVFRSDGRN 1937
Mouse 1938 VSVGEEFAGNVIGDLCDQLYFKS-------MIDLVDQRANSLGKEINLKKFQLYLKKS-FSDPLS 1994
Mouse 1995 TSLLVVENRNS----VSLSPS---SWTDN 2016 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rp1 | NP_035413.1 | DCX | 35..110 | CDD:176357 | 23/131 (18%) |
DCX | 157..232 | CDD:176357 | 16/93 (17%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 358..379 | 6/23 (26%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 643..688 | 9/58 (16%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 863..887 | 6/25 (24%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1400..1430 | 2/29 (7%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1572..1595 | 2/22 (9%) | |||
zormin | NP_001261317.1 | SPEC | 126..332 | CDD:238103 | |
SPEC | <504..641 | CDD:295325 | |||
COG1340 | 960..1298 | CDD:224259 | |||
RILP-like | <1190..1315 | CDD:304877 | |||
MAP7 | 1233..1365 | CDD:283355 | |||
I-set | 1390..1479 | CDD:254352 | |||
IGc2 | 1403..1469 | CDD:197706 | |||
I-set | 1491..1580 | CDD:254352 | |||
IGc2 | 1504..1570 | CDD:197706 | |||
I-set | 1589..1675 | CDD:254352 | |||
Ig | 1605..1675 | CDD:299845 | |||
I-set | 1702..1786 | CDD:254352 | 3/18 (17%) | ||
Ig | 1713..1786 | CDD:299845 | 3/18 (17%) | ||
I-set | 1811..1902 | CDD:254352 | 14/90 (16%) | ||
Ig | 1828..1892 | CDD:143165 | 10/63 (16%) | ||
I-set | 1927..2015 | CDD:254352 | 9/87 (10%) | ||
IGc2 | 1940..2005 | CDD:197706 | 7/64 (11%) | ||
I-set | 2142..2231 | CDD:254352 | 20/102 (20%) | ||
Ig | 2158..2231 | CDD:299845 | 16/86 (19%) | ||
I-set | 2238..2325 | CDD:254352 | 14/86 (16%) | ||
Ig | 2254..2324 | CDD:299845 | 11/69 (16%) | ||
I-set | 3566..3655 | CDD:254352 | 9/37 (24%) | ||
Ig | 3583..3650 | CDD:143165 | 5/20 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1181 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |