DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mst1r and PlexA

DIOPT Version :9

Sequence 1:XP_006511717.1 Gene:Mst1r / 19882 MGIID:99614 Length:1406 Species:Mus musculus
Sequence 2:NP_524637.2 Gene:PlexA / 43832 FlyBaseID:FBgn0025741 Length:1945 Species:Drosophila melanogaster


Alignment Length:1739 Identity:343/1739 - (19%)
Similarity:533/1739 - (30%) Gaps:681/1739 - (39%)


- Green bases have known domain annotations that are detailed below.


Mouse    65 DSTNSAVFVATRNHLHVLGPDLQFIENLTTGPIGNPGCQTCASCGPGPHGPPKDTDTLVLVMEPG 129
            |:....|||...|.|:.|.|||:..|.:.|||..:....:...|.......|.|....||:::..
  Fly    81 DTITGRVFVGGVNRLYQLSPDLELSETVKTGPQNDSVECSILDCPLNAVRSPTDNYNKVLLIDRA 145

Mouse   130 LPALVSCGSTLQGRCFLHELEPRGKALHLAAPACLFSANNNKPEACTDCVASPLGTRVTVVEQGH 194
            ...|::|||..||.|.:..|:......|....|.:  ||:............|....||.|    
  Fly   146 TSRLIACGSLFQGTCTVRNLQNVSIIEHEVPDAVV--ANDANSSTVAFIAPGPPQHPVTNV---- 204

Mouse   195 ASYFYVA------SSLDPELAASFSPRSVSIRRLKSDTSGFQPGFPSLSV-----LPKYL-ASYL 247
               .||.      |....|:.|      |:.|.|:. |..||....:::.     :..|. .:|.
  Fly   205 ---MYVGVTYTNNSPYRSEIPA------VASRSLEK-TKMFQIASSAVTTGTRTFINSYARETYF 259

Mouse   248 IKYVYSFHSGDFVYFLTVQ-PISVTSPPSALHTRLVRLNAVEPEIGDYRELVLDCHFAPKRRRRG 311
            :.|||.|.|..|.||||.| ..|..|.|....|:|||:...:.....|.|:.::|       ...
  Fly   260 VNYVYGFSSERFSYFLTTQLKHSHHSSPKEYITKLVRICQEDSNYYSYTEIPVEC-------ISD 317

Mouse   312 APEGTQPYPVLQAAHSAPVDAKLAVELSISEGQEVLFGVFVTVKDGGSGMGP--NSVVCAFPIYH 374
            |..||: :.::||.......:.||..|.||...:|||.||    ..|.|..|  ||.:|.:.:..
  Fly   318 AQGGTK-FNLVQAGFLGKPSSDLAQSLGISIQDDVLFAVF----SKGEGNTPTNNSALCIYSLKS 377

Mouse   375 LNILIEEGVEYCCHSSNSSSLLSRGLDFFQTPS--------------FC----PNPPGGEASGPS 421
            :.....:.::.|.:.|.     .|||||. :||              ||    .:|.|||.    
  Fly   378 IRRKFMQNIKSCFNGSG-----MRGLDFI-SPSMPCVLTKLQTIGEDFCGLDVNSPLGGET---- 432

Mouse   422 SRCHYFPLMVHASFTRVDLFNGLLGSVKVTALHVTRLGNVTVAHMGTVDGRVLQVEIARSLNYLL 486
                  |:    :...|.:||     .|:|::..|.....||..:||.||.:.:|.|..|.....
  Fly   433 ------PI----TSVPVAMFN-----TKLTSVAATSTSGYTVVFVGTSDGFLKKVVIESSSIANE 482

Mouse   487 YVSNFSLGSSGQPVHRDVSRLGNDLLF---ASGDQVFKVPIQGPGCRHFLTCWRCLRAQRFMGCG 548
            |.| |:: ..|..::||: :..|..|:   .|..:|.||.:.  .|..:.||..||.| |...||
  Fly   483 YAS-FAV-DLGSEINRDM-QFDNQNLYIYVMSKTKVSKVKV
F--DCSDYKTCGDCLGA-RDPYCG 541

Mouse   549 WCG--DRCDRQKECPG---------SWQQDHCPPEISEFYPHSGPLRGTTRLTL----------- 591
            ||.  ::|..:..|..         |::...| ..|:...||.  |:.||..||           
  Fly   542 WCSLENKCSPRSNCQDDANDPLYWVSYKTGKC-T
TITSVVPHQ--LQRTTARTLELIIDHLPQLK 603

Mouse   592 ----C------------------GSNFYLRPDDVVP---EGTHQITV------------------ 613
                |                  |.|......|::|   :|.|..|.                  
  Fly   604 ENLICAFTTEDKALFTNATKKRNGVNCTTPRTDMLPQIEQGKHHFTAKLSVRTRNGPDLVSTDFT 668

Mouse   614 ---------------GQSPC---------------------------RLLPKDSSSP-------- 628
                           .:.||                           |:.|...|.|        
  Fly   669 FFDCSTHSSCTRCVSSEFPCDWCVEAHRCTHDTAENCRNDILVTGVSRIGPSYRSGPGFCPTINA 733

Mouse   629 -RPGS------------------LKEFIQE--------LECELEPLVTQAVGTT----------- 655
             ..||                  :.:||.:        :|..:..|..|.:|.|           
  Fly   734 TGDGSEVLVAGGTSKSIKVKVHIIGQFIVQTRFVCQFNIEGRVTSLNAQLLGDTIYCDSMEFQYT 798

Mouse   656 ------------------------NISLVI----------------------------------- 661
                                    ||.:||                                   
  Fly   799 SRSPNLTATFAVIWGGSKPLDNPHNIHVVIYRCREMADSCGICLALSEKYNCGWCSSTNTCEVEE 863

Mouse   662 -------------------------------------TNMP-----AGKHF-------RVEGISV 677
                                                 ||:.     .||::       |:.||:.
  Fly   864 QCNKNKEGKTDWLNRSEICPNPEIHTFQPKTGPWEGGTNITIRGINLGKNYNDIYSGVRIAGINC 928

Mouse   678 -----------------------------------------QEGFSFVEPVLTSIKPDFGPRAGG 701
                                                     :|.:.||:|.:....|.|||.:||
  Fly   929 MPFPQFYIDTKQIVCTVDSPGEQMYRNGKIVVQIGDYRGESKEDYEFVDPKILDFNPKFGPTSGG 993

Mouse   702 TYLTLEGQSLSVGTSRAVLVNG-TQCRLEQVNEEQILCVT--PPGAGTARVPLHLQIGGAEVPGS 763
            |.:.:.|:.|:.|:.....:|. ..|::...:..|.:|.|  .||....|:.:....|..|. ..
  Fly   994 TEIHITGKHLNAGSRIQASINDHLPCKILSTDSSQAICRTSASPGIIEGRLKMSFDNGPREF-ND 1057

Mouse   764 WTFHYKEDPIVLDIS---------PK-CGYSGSHIMIHGQHLTSAWHFTL-SFHDG--------- 808
            :.|.|..||.|..:|         || ....|..|.:.|...||..:..: ..::|         
  Fly  1058 YNFKYVLDPTVEHVSSGPSGQIKVPKGIPAGGIRISVTGTQFTSIQNPNIYVVYNGEMYASPCRV 1122

Mouse   809 QSTVESRQCAGQFVEQ-----QQRRCRLPEYVVRNPQGWATGNLSVWGDGAAGFTLPGFRFLPPP 868
            ||..| .:||...|:.     :..|..|.||                     ||.:.....:...
  Fly  1123 QSDTE-MECASPVVDVDSHVIEAERPILLEY---------------------GFLMDNVLRVQNL 1165

Mouse   869 SPLRAGLVELKPE------EHSVKV---EYV-----GLGAVADCVTVNMTVGGEVCQ-------- 911
            |.:.....||.|.      |..||.   ||:     .|........|.:.:|...|.        
  Fly  1166 SKVHNNHFELYPNPEYFIFEERVKYFKSEYLTINGRNLDRACKESDVEVKIGNGFCNITSLSRQQ 1230

Mouse   912 ------------HELRGDVVICPLPPSLQLGKDGV----PLQVCVDGGCHILSQVVRSSPGRASQ 960
                        ..:.|..||..:..||:. :.|:    ...:.:|.|.:::..|          
  Fly  1231 LTCRPPSEATATKSMNGPEVIVRIGTSLEY-RIGILSYESSNIILDWGENVIFAV---------- 1284

Mouse   961 RILLIALLVLILLVAVLAVALIFNSRRRKKQLGAHSLSPTTLSDINDTASGAPNHEESSE----- 1020
                ||.:|::||:   .|||:...:::..:......:.....||.:....|...|..:|     
  Fly  1285 ----IATIVILLLI---FVALLVAYKKKSSESSRVLRNMQEQMDILELRVAAECKEAFAELQTEM 1342

Mouse  1021 ---SRDGTS--VPLLRTESIRLQDLDRMLLAEVKDVLIPHEQVVIHTDQVI-------------G 1067
               :.|.||  :|.|...|..::            :|.|:     |.|.::             |
  Fly  1343 TDLTGDLTSGGIPFLDYRSYAMK------------ILFPN-----HEDHIVLQWERPELLRKEKG 1390

Mouse  1068 KGHFGVVYHGEYTDGAQNQTHCAIKSLSRITEVQEVEAF-LREGLLMRGLHHPNILALIGIMLPP 1131
            ...||.:        ..|:|..    |..|..::....| :||.:        |:.:||.:.|..
  Fly  1391 LRIFGQL--------IMNKTFL----LLFIRTLESNRYFSMRERV--------NVASLIMVTLQS 1435

Mouse  1132 E-----GLPRVLLPYMRHGDLLHFIRSPQRVSDHCPGWEVSASTHP--CLRSPVTL--------- 1180
            :     .:.:.||     |||:          :.|    :...:||  .||...::         
  Fly  1436 KLEYCTDILKTLL-----GDLI----------EKC----IEGKSHPKLLLRRTESVAEKMLSAWF 1481

Mouse  1181 ----------CPQNP------TVKDLVSFGLQVACGME---YLAEQKFVHRDLAARN-------- 1218
                      |...|      .||..|..|...||..|   .|:|:|.:.:.:..|.        
  Fly  1482 TFLLYKFLKECAGEPLYMLFRAVKGQVDKGPVDACTHEARYSLSEEKLIRQSIDFRPMNVYASII 1546

Mouse  1219 -----C----ML---DESFTVKVADFG------------LARGV----------LDKEYYSVRQH 1249
                 |    ||   .|:.:|||.|..            :.|.:          ||.|:.:....
  Fly  1547 QQPIFCNNLDMLPSHTENVSVKVLDCDTIGQVKEKCLETIYRNIPSSQRPRKDDLDLEWRTGATG 1611

Mouse  1250 R--------HARLPVKWMALESLQTYR---------FTTKSDVWSFGVL 1281
            |        .::...:|..|.:||.|.         ...:|.:::|.:|
  Fly  1612 RVILYDEDVTSKTESEWKKLNTLQHYNVPDGAGLSLVPKQSSIYNFSIL 1660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mst1rXP_006511717.1 Sema_RON 29..525 CDD:200540 133/495 (27%)
PSI 528..570 CDD:214655 14/52 (27%)
IPT 571..685 CDD:387656 44/404 (11%)
IPT_plexin_repeat2 686..770 CDD:238584 23/86 (27%)
IPT 771..864 CDD:214657 24/117 (21%)
PKc_like 1064..1352 CDD:389743 58/326 (18%)
PlexANP_524637.2 Sema_plexin_like 75..520 CDD:200497 133/494 (27%)
PSI 522..574 CDD:279745 15/53 (28%)
PSI 671..>699 CDD:279745 2/27 (7%)
PSI 830..883 CDD:279745 0/52 (0%)
IPT_plexin_repeat1 885..977 CDD:238585 9/91 (10%)
IPT_plexin_repeat2 978..1063 CDD:238584 22/85 (26%)
IPT 1078..1177 CDD:301692 23/120 (19%)
IPT_PCSR 1196..>1255 CDD:238337 7/58 (12%)
Plexin_cytopl 1353..1916 CDD:285529 65/364 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3610
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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