Sequence 1: | XP_017172382.1 | Gene: | Robo1 / 19876 | MGIID: | 1274781 | Length: | 1687 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608592.2 | Gene: | robo3 / 33314 | FlyBaseID: | FBgn0041097 | Length: | 1342 | Species: | Drosophila melanogaster |
Alignment Length: | 1291 | Identity: | 391/1291 - (30%) |
---|---|---|---|
Similarity: | 589/1291 - (45%) | Gaps: | 236/1291 - (18%) |
- Green bases have known domain annotations that are detailed below.
Mouse 96 QEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSL 160
Mouse 161 FFLRIVHGRKSRPDEGVYICVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQ 225
Mouse 226 PPRGHPEPTISWKKDGSPLD---DKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVA 287
Mouse 288 ELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRK--DDGELPKSRYEIRDDHTLKI 350
Mouse 351 RKVTAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQ 415
Mouse 416 PAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGD----LTITNVQRSDVGYYI-CQTLNVAGSIIT 475
Mouse 476 KAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLILSCVATGSPAPTILWRKDGVLVSTQDSRIKQ 540
Mouse 541 LESGVLQIR-YAKLGDTGRYTCTASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNL--------- 595
Mouse 596 -IPSAPSKPEVTDVSKNTVTLSWQPNLNSGATP-TSYIIEAFSHASGSSWQTAAENVKTETFAIK 658
Mouse 659 GLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQREL---------GNVVL 714
Mouse 715 HLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGASHGESEWLVFEVRTPTKNSVVIPDLRK 779
Mouse 780 GVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPRSVTVSKNDGNGTAILVTWQPP-PEDTQN 843
Mouse 844 GMVQEYKVWCLG----NETKYHINKTVDGSTFSVVIPSLVPGIRYSVEVAASTGAGPGVKSEPQF 904
Mouse 905 IQLDSHGNPV-SPEDQVSLAQQIS-DVVRQPAFIAGIGAACWIILMVF-SIWLYRHRK--KRNGL 964
Mouse 965 TSTYAG-----IRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQPWLADT---WPNTGN 1021
Mouse 1022 NHNDCSINCC------------TAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVY 1074
Mouse 1075 GDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPT-----------------PYATTQLI------- 1115
Mouse 1116 --------QANLSNNMNNGAGD--SSEKHWKPPG-------------QQKPEV------------ 1145
Mouse 1146 ---APIQYNIMEQNKLN----KDYRANDTIPPTIPYNQ---------SYDQNTGGSYNSSDRGSS 1194
Mouse 1195 TS-GSQGHKKGARTPK-------------------------APKQGGMNWADLLPP 1224 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Robo1 | XP_017172382.1 | Ig1_Robo | 100..199 | CDD:143317 | 57/98 (58%) |
Ig2_Robo | 207..291 | CDD:143201 | 39/86 (45%) | ||
Ig3_Robo | 312..380 | CDD:143202 | 26/69 (38%) | ||
Ig4_Robo | 401..490 | CDD:143203 | 33/93 (35%) | ||
I-set | 491..578 | CDD:369462 | 36/87 (41%) | ||
FN3 | 597..683 | CDD:238020 | 25/86 (29%) | ||
FN3 | 720..806 | CDD:238020 | 20/85 (24%) | ||
fn3 | 814..897 | CDD:365830 | 27/87 (31%) | ||
robo3 | NP_608592.2 | Ig | 22..117 | CDD:299845 | 57/98 (58%) |
I-set | 23..116 | CDD:254352 | 56/96 (58%) | ||
I-set | 122..211 | CDD:254352 | 41/89 (46%) | ||
Ig | 125..211 | CDD:299845 | 39/86 (45%) | ||
I-set | 215..302 | CDD:254352 | 30/86 (35%) | ||
Ig | 232..302 | CDD:299845 | 26/69 (38%) | ||
I-set | 306..401 | CDD:254352 | 34/96 (35%) | ||
Ig | 320..411 | CDD:299845 | 33/93 (35%) | ||
I-set | 412..492 | CDD:254352 | 33/80 (41%) | ||
IGc2 | 429..489 | CDD:197706 | 24/60 (40%) | ||
FN3 | 519..612 | CDD:238020 | 29/92 (32%) | ||
FN3 | 644..735 | CDD:238020 | 22/93 (24%) | ||
fn3 | 743..832 | CDD:278470 | 28/90 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 104 | 1.000 | Domainoid score | I6680 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4222 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2206 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8796 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101537 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.670 |