DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6a16 and Cyp4a8

DIOPT Version :9

Sequence 1:NP_001285631.1 Gene:Cyp6a16 / 19836250 FlyBaseID:FBgn0031726 Length:500 Species:Drosophila melanogaster
Sequence 2:XP_038965258.1 Gene:Cyp4a8 / 266674 RGDID:628846 Length:510 Species:Rattus norvegicus


Alignment Length:520 Identity:151/520 - (29%)
Similarity:243/520 - (46%) Gaps:65/520 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLLLTSLLSFLLGYLRYRFTYWELRG---IPQLRPHFLFGHFFRLQSVHYSELLQETYDAFRGSA 66
            ||||.....|   ||..|   |.||.   .|....|:.|||       ..|.|:.:.:.......
  Rat    28 LLLLFKTAQF---YLHRR---WLLRATQQFPSPPSHWFFGH-------KLSFLVDQEFQDILTRV 79

  Fly    67 K---------VAGTYVFLRPMAVVLDLDLVKAVLIRDFNNFVDRRSFHGDPLTA-----NLFNLQ 117
            |         :.|:.|.::    |.|.|.:|.:|.|.     |.:|.|.....|     .|..|.
  Rat    80 KNFPSACPQWLWGSNVRIQ----VYDPDYMKLILGRS-----DPKSHHSYRFLAPWIGYGLLLLN 135

  Fly   118 GEEWRNLRTKLSPTFTSGKMKYMFGTVSTVAQQLGGTFDELVGSQGAVLELHDLMARYTTDVIGS 182
            |:.|...|..|:|.|....:|...|.::...:.:...::::|| |.:.||:...:...|.|.|..
  Rat   136 GQTWFQHRRMLTPAFHYDTLKPYVGIMADSVRIMLDKWEQIVG-QDSTLEIFQHITLMTLDTIMK 199

  Fly   183 CAFGTECSSLREPQAEFRQVGRRIFRNSNRS---IRWRIFKMTYLSSLAKLGLPVRIL------H 238
            |||..|.|.  :...:::...:.:...:|.|   ||....:...:.||:..|...|..      |
  Rat   200 CAFSQEGSV--QLDRKYKSYIKAVEDLNNLSFFRIRNIFHQNDIIYSLSSNGRKARSAWQLAHEH 262

  Fly   239 PD-ITKFFNRIVRETVELRERENIRRNDFMDLLLDLRRQENGKGLTMEQMAAQAFVFFVAGFETS 302
            .| :.|.....:::..||::.:..||.||:|:|| ..|.|||..|:.:.:.|:...|...|.:|:
  Rat   263 TDQVIKSRKAQLQDEEELQKVKQKRRLDFLDILL-FARIENGSSLSDKDLRAEVDTFMFEGHDTT 326

  Fly   303 SSNMSYALFELAKNQDVQQKLRMEINDSIGKHGKLTYEAMMEMPYLDQTITETLRKYPALSSLTR 367
            :|.:|:..:.||.|.:.||..|.||...:|....:|::.:.:|||....|.|.||.||.:::::|
  Rat   327 ASGISWIFYALATNPEHQQGCRKEIQSLLGDGASITWDDLDKMPYTTMCIKEALRIYPPVTAVSR 391

  Fly   368 LASEDYEIPSPDGGDPVVLEKGTSVHIPVLAIHYDPEVYPEPHEFRPERFAPDACRERHPTAFLG 432
            :.|.  .:..|||..   |.||.:|.:....:|::|.|:|.|..|.|.||||::.|..|  :||.
  Rat   392 MLST--PVTFPDGRS---LPKGITVMLSFYGLHHNPTVWPNPEVFDPYRFAPESSRHSH--SFLP 449

  Fly   433 FGDGPRNCIGLRFGRMQVKVGL-ITLLRRFRFSLPPGSPTQLKVTKRNLILLPSDGVRLQVDPVE 496
            |..|.|||||.:|...::||.: :|||   ||.|.| .||::.:....|:|...:|:.|::..::
  Rat   450 FSGGARNCIGKQFAMNELKVAVALTLL---RFELLP-DPTRIPIPIPRLVLKSKNGIYLRLKKLQ 510

  Fly   497  496
              Rat   511  510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6a16NP_001285631.1 p450 32..492 CDD:278495 140/484 (29%)
Cyp4a8XP_038965258.1 CYP4B-like 72..505 CDD:410771 132/456 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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