DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG45546 and swm-1

DIOPT Version :9

Sequence 1:NP_001287583.1 Gene:CG45546 / 19835889 FlyBaseID:FBgn0267106 Length:93 Species:Drosophila melanogaster
Sequence 2:NP_505346.1 Gene:swm-1 / 182893 WormBaseID:WBGene00023417 Length:135 Species:Caenorhabditis elegans


Alignment Length:83 Identity:20/83 - (24%)
Similarity:42/83 - (50%) Gaps:12/83 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LILVTSMWNIQTSNGSVQLMLRLYFQCSSKEIVSPCRSCERSCGQRETLDCVKDCRYG-CICKMG 74
            |:::|.:..:.|:..:.:         :::|:||...:||..||..... |.:.|... |.||.|
 Worm     4 LVIITCIVAVATATKTCE---------ANEELVSCHNTCEPQCGYTPKA-CTEQCIMNTCDCKDG 58

  Fly    75 WIRRN-STCIPMSQCEQK 91
            ::|.: ..|:.:|:|.::
 Worm    59 FVRNSLGKCVEVSECTKE 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45546NP_001287583.1 TIL 37..88 CDD:280072 16/52 (31%)
swm-1NP_505346.1 TIL 20..73 CDD:366828 16/62 (26%)
TIL 80..133 CDD:366828
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1625853at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X701
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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