DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG44271 and AT1G19310

DIOPT Version :9

Sequence 1:NP_001285689.1 Gene:CG44271 / 19835868 FlyBaseID:FBgn0265257 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_564078.1 Gene:AT1G19310 / 838513 AraportID:AT1G19310 Length:226 Species:Arabidopsis thaliana


Alignment Length:55 Identity:23/55 - (41%)
Similarity:31/55 - (56%) Gaps:8/55 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SDRNN---GHYLCPICMSLPDHPVATTCGHIFCKECLTTALNQLHY----CPLCK 95
            :|.||   .::.|.||:.|...|:.|.|||:||..||...|: ||.    ||:||
plant    11 NDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLH-LHSQSKDCPVCK 64

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44271NP_001285689.1 RING 57..95 CDD:238093 18/41 (44%)
AT1G19310NP_564078.1 rad18 21..>112 CDD:273165 20/45 (44%)
RING-HC_AtRMA_like 21..65 CDD:319659 20/45 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1510545at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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