DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG44271 and AT1G19310

DIOPT Version :10

Sequence 1:NP_001285689.1 Gene:CG44271 / 19835868 FlyBaseID:FBgn0265257 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_564078.1 Gene:AT1G19310 / 838513 AraportID:AT1G19310 Length:226 Species:Arabidopsis thaliana


Alignment Length:55 Identity:23/55 - (41%)
Similarity:31/55 - (56%) Gaps:8/55 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SDRNN---GHYLCPICMSLPDHPVATTCGHIFCKECLTTALNQLHY----CPLCK 95
            :|.||   .::.|.||:.|...|:.|.|||:||..||...|: ||.    ||:||
plant    11 NDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLH-LHSQSKDCPVCK 64

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44271NP_001285689.1 COG5152 <12..94 CDD:227481 21/52 (40%)
RING_Ubox 57..>99 CDD:473075 20/43 (47%)
AT1G19310NP_564078.1 rad18 21..>112 CDD:273165 20/45 (44%)
RING-HC_AtRMA-like 21..65 CDD:438403 20/45 (44%)

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