DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG44271 and RMA1

DIOPT Version :10

Sequence 1:NP_001285689.1 Gene:CG44271 / 19835868 FlyBaseID:FBgn0265257 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_192260.1 Gene:RMA1 / 825654 AraportID:AT4G03510 Length:249 Species:Arabidopsis thaliana


Alignment Length:80 Identity:24/80 - (30%)
Similarity:37/80 - (46%) Gaps:22/80 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 TVDLTTDDEERPVLRLLSDRNNGHYLCPICMSLPDHPVATTCGHIFCKECL----------TTAL 85
            ||.:.:||.:           :.::.|.||:.....||.|.|||:||..|:          |:..
plant    33 TVSVPSDDTD-----------DSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDE 86

  Fly    86 NQLH-YCPLCKNFVT 99
            .|.| .||:||:.|:
plant    87 YQRHRQCPVCKSKVS 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44271NP_001285689.1 COG5152 <12..94 CDD:227481 21/73 (29%)
RING_Ubox 57..>99 CDD:473075 19/52 (37%)
RMA1NP_192260.1 PLN03208 40..249 CDD:178747 21/73 (29%)

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