DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG44271 and AT2G42030

DIOPT Version :9

Sequence 1:NP_001285689.1 Gene:CG44271 / 19835868 FlyBaseID:FBgn0265257 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_181733.1 Gene:AT2G42030 / 818803 AraportID:AT2G42030 Length:425 Species:Arabidopsis thaliana


Alignment Length:87 Identity:28/87 - (32%)
Similarity:48/87 - (55%) Gaps:7/87 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MEGLRRAGDGMKTLETVDLTTDDEERPVLRLLSDRNNGHYL-CPICMSLPDHPVATTCGHIFCKE 79
            :|..::..:|.|.:...::|  :|:|.|.:  |..::|.:. |.||:.|...||.|.|||::|..
plant   103 IEDSKKCENGSKVMAEDNVT--EEKRDVEK--SVGSDGSFFDCYICLDLSKDPVVTNCGHLYCWS 163

  Fly    80 CLTTAL--NQLHYCPLCKNFVT 99
            ||...|  ::...||:||..|:
plant   164 CLYQWLQVSEAKECPVCKGEVS 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44271NP_001285689.1 RING 57..95 CDD:238093 16/39 (41%)
AT2G42030NP_181733.1 PLN03208 124..>214 CDD:178747 24/64 (38%)
RING-HC_AtRMA_like 139..182 CDD:319659 17/42 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1510545at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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