DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG45065 and Chdh

DIOPT Version :9

Sequence 1:NP_001285251.1 Gene:CG45065 / 19835504 FlyBaseID:FBgn0266435 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_942026.1 Gene:Chdh / 290551 RGDID:735166 Length:599 Species:Rattus norvegicus


Alignment Length:584 Identity:223/584 - (38%)
Similarity:310/584 - (53%) Gaps:76/584 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 QYDFVVIGGGSAGAVVANRLSEVRNWTVLLLEAGGDET---------EISDVPALAGYLQLTELD 98
            :|.|:|:|.||||.|:||||:|..|..|||||||..:.         :|....||...|...:.:
  Rat    45 EYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLCDDKYN 109

  Fly    99 WKYQTTPSSTRQYCQAMKGDRCFWPRGKVLGGSSVLNAMVYVRGSKNDYNHWASLGNPGWDYDSM 163
            |.|.|...      ..:.|...:||||:|.||||.||||||:||...|||.|...|..||||...
  Rat   110 WYYHTEAQ------PGLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGAEGWDYAHC 168

  Fly   164 LKYFLKSEDVRNPYLAKTPYHETG--------GYLTVQEAPWRTPLSIAFLQAGIEMGYE-NRDI 219
            |.||.|::.           ||.|        |.|.|.......||..|||||..:.||. ..|:
  Rat   169 LPYFRKAQK-----------HELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDM 222

  Fly   220 NGAQQTGFMLTQSTIRRGARCSTGKAFIRPVRQRKNFDVLLHAEATRILFDKQKRAIGVEYMRGG 284
            ||.||.||.....||.:|.|.||..|::||...|.|....:....:|:||: ..||:||||::.|
  Rat   223 NGFQQEGFGWMDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFE-GTRAVGVEYIKDG 286

  Fly   285 RKNVVFVRREVIASAGALNTPKLLMLSGVGPAEHLQEHNIPVISDLP-VGNNMQDHVGLGGLTFV 348
            :.:..:|.||||.|.||:|:|:||||||||.|:.|::..|||:..|| ||.|:|||:.:    ::
  Rat   287 QSHKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGVGQNLQDHLEI----YI 347

  Fly   349 VDA---PLTV--TRNRFQTIPVSMEYILRERGPMTFSGVEGVAFLNTKYQDPSVDWPDVQFHFCP 408
            ..|   |:|:  .:...:.:.:.:|::.|..|....:.:|...|:.::   |.|..||:||||.|
  Rat   348 QHACTQPITLHSAQKPLRKVCIGLEWLWRFTGDGATAHLETGGFIRSR---PGVPHPDIQFHFLP 409

  Fly   409 SSINSDGGEQIRKILNLRDGFYNTVYKPLQHSETWSILPLLLRPKSTGWVRLNSRNPQHQPKIIP 473
            |.:...|                  .||.| .|.:.:....:|..|.||::|.|.|||..|.|.|
  Rat   410 SQVIDHG------------------RKPTQ-QEAYQVHVGTMRATSVGWLKLRSTNPQDHPMINP 455

  Fly   474 NYFAHQEDIDVLVEGIKLAINVSNTQAFQRF-GSRLHNIPLPGCRHLPFQSNEYWACCIKEFTFT 537
            ||.:.:.|::...:.:||...:...:||..| |..|.    || .|:  ||::.....::....:
  Rat   456 NYLSTETDVEDFRQCVKLTREIFAQEAFAPFRGKELQ----PG-SHV--QSDKEIDAFVRAKADS 513

  Fly   538 IYHPAGTCRMGPSWDVTAVVDPRLRVYGVSGVRVVDASIMPTIVNGNPNAPVIAIGEKASDLIK 601
            .|||:.||:||...|.|||||.:.||.||..:||:||||||::|:||.|||.|.|.|||:|:||
  Rat   514 AYHPSCTCKMGQPSDPTAVVDQQTRVIGVENLRVIDASIMPSVVSGNLNAPTIMIAEKAADVIK 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45065NP_001285251.1 PRK02106 42..601 CDD:235000 221/582 (38%)
NADB_Rossmann 117..339 CDD:304358 103/231 (45%)
GMC_oxred_C 452..596 CDD:282984 60/144 (42%)
ChdhNP_942026.1 PRK02106 45..591 CDD:235000 223/584 (38%)
NADB_Rossmann 49..>151 CDD:304358 45/107 (42%)
GMC_oxred_N 121..344 CDD:279121 105/234 (45%)
GMC_oxred_C 435..572 CDD:282984 60/143 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 244 1.000 Domainoid score I2129
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 342 1.000 Inparanoid score I2269
OMA 1 1.010 - - QHG52181
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm44531
orthoMCL 1 0.900 - - OOG6_100146
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X135
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.870

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