DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG45063 and Atp2b3

DIOPT Version :9

Sequence 1:NP_001286728.1 Gene:CG45063 / 19835490 FlyBaseID:FBgn0266433 Length:252 Species:Drosophila melanogaster
Sequence 2:XP_006528144.1 Gene:Atp2b3 / 320707 MGIID:1347353 Length:1249 Species:Mus musculus


Alignment Length:220 Identity:51/220 - (23%)
Similarity:87/220 - (39%) Gaps:54/220 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LCARLEANVSQGLTSEAAGRKLARN--GKNVLPLPTKLELRPWIFLKSCFSILG----IIILLSS 111
            ||.||:.:.::||.......:..|.  |:|.:|     ..:|..||:..:..|.    ||:.:::
Mouse    59 LCRRLKTSPTEGLADNTNDLEKRRQIYGQNFIP-----PKQPKTFLQLVWEALQDVTLIILEVAA 118

  Fly   112 IASFAMYYL------------FATKTPDNGKVDPEFLVAGIIL-------LVTFF--------LA 149
            |.|..:.:.            .:....|.|:.:..::....||       |||.|        ..
Mouse   119 IVSLGLSFYAPPGEESEACGNVSGGAEDEGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFR 183

  Fly   150 GLTVQMQGDDDEDMLIAFDELMPMYCTVIRDGEKEVIRTQDLVPGDTLPIKYGQRLPADMRFFST 214
            ||..:::.:..              .||||:|:...:....||.||...:|||..||||......
Mouse   184 GLQSRIEQEQK--------------FTVIRNGQLLQVPVAALVVGDIAQVKYGDLLPADGVLIQG 234

  Fly   215 TGLELNNVALTGHSKPMHITPLANE 239
            ..|:::..:|||.|.  |:...|::
Mouse   235 NDLKIDESSLTGESD--HVRKSADK 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45063NP_001286728.1 Cation_ATPase_N 46..117 CDD:214842 18/69 (26%)
E1-E2_ATPase 140..>230 CDD:278548 29/104 (28%)
Atp2b3XP_006528144.1 ATPase-IIB_Ca 19..1061 CDD:273668 51/220 (23%)
ATP_Ca_trans_C 1100..1175 CDD:372101
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830993
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.