DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG45063 and Atp2b3

DIOPT Version :9

Sequence 1:NP_001286728.1 Gene:CG45063 / 19835490 FlyBaseID:FBgn0266433 Length:252 Species:Drosophila melanogaster
Sequence 2:XP_038955468.1 Gene:Atp2b3 / 29599 RGDID:621304 Length:1330 Species:Rattus norvegicus


Alignment Length:220 Identity:51/220 - (23%)
Similarity:87/220 - (39%) Gaps:54/220 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LCARLEANVSQGLTSEAAGRKLARN--GKNVLPLPTKLELRPWIFLKSCFSILG----IIILLSS 111
            ||.||:.:.::||.......:..|.  |:|.:|     ..:|..||:..:..|.    ||:.:::
  Rat    59 LCRRLKTSPTEGLADNTNDLEKRRQIYGQNFIP-----PKQPKTFLQLVWEALQDVTLIILEVAA 118

  Fly   112 IASFAMYYL------------FATKTPDNGKVDPEFLVAGIIL-------LVTFF--------LA 149
            |.|..:.:.            .:....|.|:.:..::....||       |||.|        ..
  Rat   119 IVSLGLSFYAPPGEESEACGNVSGGAEDEGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFR 183

  Fly   150 GLTVQMQGDDDEDMLIAFDELMPMYCTVIRDGEKEVIRTQDLVPGDTLPIKYGQRLPADMRFFST 214
            ||..:::.:..              .||||:|:...:....||.||...:|||..||||......
  Rat   184 GLQSRIEQEQK--------------FTVIRNGQLLQVPVAALVVGDIAQVKYGDLLPADGVLIQG 234

  Fly   215 TGLELNNVALTGHSKPMHITPLANE 239
            ..|:::..:|||.|.  |:...|::
  Rat   235 NDLKIDESSLTGESD--HVRKSADK 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45063NP_001286728.1 Cation_ATPase_N 46..117 CDD:214842 18/69 (26%)
E1-E2_ATPase 140..>230 CDD:278548 29/104 (28%)
Atp2b3XP_038955468.1 ATPase-IIB_Ca 19..1142 CDD:273668 51/220 (23%)
ATP_Ca_trans_C 1181..1256 CDD:403580
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334706
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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