DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG45062 and atp1a1a.3

DIOPT Version :10

Sequence 1:NP_001286726.1 Gene:CG45062 / 19835139 FlyBaseID:FBgn0266432 Length:794 Species:Drosophila melanogaster
Sequence 2:NP_571763.1 Gene:atp1a1a.3 / 64614 ZFINID:ZDB-GENE-001212-3 Length:1024 Species:Danio rerio


Alignment Length:817 Identity:249/817 - (30%)
Similarity:429/817 - (52%) Gaps:69/817 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NMGLACTHAISGIGFAVALACGRNTEVGSMTDLCFKERSRSRSQKHQ----KQISYYMLLVAIVC 73
            |:....|:.:.|....|.:..|..|.:|.:..|.      |..:..|    ::|.:::.::..|.
Zfish   242 NIAFFSTNCVDGAARGVVVNTGDRTVMGRIASLA------SSLEGGQTPIAREIEHFIHIITGVA 300

  Fly    74 ------FILLFLTTGFE--HGHIVYEVNLSLLIGLTPVYLPFILYWGLRRTRKEMGRKQCHVRNL 130
                  |::|.|..|:.  .|.|..   :.:::...|..||..:...|..|.|.|.:|.|.|:||
Zfish   301 VFLGLTFLVLSLILGYNWLEGVIFL---IGIIVANVPEGLPATVTVCLTLTAKRMAKKNCLVKNL 362

  Fly   131 RATCTLGLSTVIVSDLVGTMTKRRMRVSEIFVDMGLLSVDNLD------VSAQSPRFIELIRASV 189
            .|..|||.:|.|.||..||:|:.||.|:.::.|..:...|..:      ....|..:..|.|.:.
Zfish   363 EAVETLGSTTTICSDKTGTLTQNRMTVAHMWFDNHIHIADTTENQTGASFDRSSATWSALARVAG 427

  Fly   190 LCNDAVICPGNIGVPKMQKDMYGNILDIALLKFGLMILPSIDLLRHDHEKVANKHYNSEDKVQVT 254
            |||.||.......:|.:::|..|:..:.||||...:...|:..:|.::.|:|...:||.:|.||:
Zfish   428 LCNRAVFQSNQSHIPVLKRDTAGDASESALLKCIELSCGSVAEMRENYTKLAEIPFNSTNKYQVS 492

  Fly   255 VHRTRDADGHLKLVLLMKGHCEVVIRRCSTFAIRDEELPLDEQLQEIILSLADGLLEAGRHVRAF 319
            :|:..:: ...|.:|:|||..|.::.||||..|:.:|.|:|:::::...:....|...|..|..|
Zfish   493 IHKNPNS-SEPKHLLVMKGAPERILERCSTIFIQGKEQPMDDEMKDAFQNAYLELGGLGERVLGF 556

  Fly   320 AYKELSDELEFRRFSQVNTGLEGGEYKYRDYLAVDTYSLRFLGMIATYNPPRSTIPKAVDRCRAA 384
            .:..|.|:    :|.      ||..:...: :...|.:|.|:|:::..:|||:.:|.||.:||:|
Zfish   557 CHFCLPDD----QFP------EGFAFDTEE-MNFPTENLCFVGLMSMIDPPRAAVPDAVAKCRSA 610

  Fly   385 GIKLIVVTQRKPKMAKALAVDVGILPAPSDTFQ------AVNLKRMPP---TAEVV---DMSQYA 437
            |||:|:||...|..|||:|..|||:...::|..      .:::..:.|   .|.|:   ::....
Zfish   611 GIKVIMVTGDHPITAKAIAKGVGIISEGNETVDDIAARLKIHIDEVNPRDAKACVIHGGELKNMT 675

  Fly   438 DEKPQHQRRHIEQLILNQQDLVCAATSTDQLHWIADACRRLGAVVSVIGGTLHDTPAMRSSHVGV 502
            ||:       ::.::.:..::|.|.||..|...|.:.|:|.||:|:|.|..::|:||::.:.:||
Zfish   676 DEQ-------LDDVLQHHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGV 733

  Fly   503 AK--YGSAVMCEASADLILLDTSFATLVSVVGDSRLLFENLKKALAYCLATNICNILVYLFFFLL 565
            |.  .||.|..:| ||:||||.:||::|:.|.:.||:|:||||::||.|.:.|..:..:|.|.|:
Zfish   734 AMGIAGSDVSKQA-ADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSKIPEMSPFLMFVLV 797

  Fly   566 GIPLYIHIMDELILAFLVNLVPALTLIYEPPEENLMLQMPK-VYDDFLLNSRLFFVSHILVGTIE 629
            ||||.:..:..|.:....::|||::|.||..|.::|.:.|: ...|.|:|.||..||:..:|.|:
Zfish   798 GIPLPLGTVTILCIDLGTDMVPAISLAYETAESDIMKRQPRNAATDRLVNERLISVSYGQIGMIQ 862

  Fly   630 AAAVFMTYFVFMADKGFLPRTLVALNIAWHDDMLDDITDSFGQEWSSEARRQLECQVSSLCLMSL 694
            |...|.||||.:|:.||||..||.:.:.|.|..|:|:.||:||:|:.|:|:.:|....:....|:
Zfish   863 AVGGFFTYFVILAENGFLPYDLVGIRVGWEDRFLNDLEDSYGQQWTYESRKIVEYTCHTAFFASI 927

  Fly   695 AVMQCTNLVLTKTGRANLLAHGFRNWLLSLAVLLLICLCVQLCIMDSTVCLRLEGTNELHFGHFL 759
            .::|.|:|::.||.|.::...|.:|.:|:..:|....|...|     :.|..:|....::....|
Zfish   928 VIVQWTDLLICKTRRLSIFQQGMKNRVLTFGLLEETALAAFL-----SYCPGMEVAVRMYPLKPL 987

  Fly   760 LTNC--PFMILLVFIETTRRYFIRLFPDSWLELATMY 794
            ...|  |:.:|:...:..|:|.:|..|..|:|..|.|
Zfish   988 WWFCAFPYSLLIFIYDEVRKYILRRNPGGWVERETYY 1024

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45062NP_001286726.1 ATPase-IIC_X-K <13..794 CDD:273445 248/815 (30%)
atp1a1a.3NP_571763.1 ATPase-IIC_X-K 32..1024 CDD:273445 248/815 (30%)

Return to query results.
Submit another query.