DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG45062 and atp2a1

DIOPT Version :10

Sequence 1:NP_001286726.1 Gene:CG45062 / 19835139 FlyBaseID:FBgn0266432 Length:794 Species:Drosophila melanogaster
Sequence 2:XP_012810385.1 Gene:atp2a1 / 613090 XenbaseID:XB-GENE-975115 Length:996 Species:Xenopus tropicalis


Alignment Length:855 Identity:188/855 - (21%)
Similarity:352/855 - (41%) Gaps:182/855 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NMGLACTHAISGIGFAVALACGRNTEVGSMTD-LCFKERSRSRSQKHQKQISYYM-LLVAIVCFI 75
            ||..:.|:..:|....|.:|.|.|||:|.:.| :...|:.::..|:...:....: .:::::|..
 Frog   206 NMLFSGTNVGAGKAIGVVIATGPNTEIGKIRDEMAATEQEKTPLQQKLDEFGEQLSKVISLICVA 270

  Fly    76 LLFLTTG----------FEHGHIVY-EVNLSLLIGLTPVYLPFILYWGLRRTRKEMGRKQCHVRN 129
            :..:..|          :..|.|.| ::.::|.:...|..||.::...|....:.|.:|...||:
 Frog   271 VWLINIGHFNDPIHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRS 335

  Fly   130 LRATCTLGLSTVIVSDLVGTMTKRRMRVSEIF----VDMGLLSVDNLDV--SAQSPR-------- 180
            |.:..|||.::||.||..||:|..:|.|..:|    ||..:.|::...:  |..:|.        
 Frog   336 LPSVETLGCTSVICSDKTGTLTTNQMSVCRMFVLDKVDGDICSLNEFSITGSTYAPEGEVLKNDK 400

  Fly   181 ---------FIELIRASVLCNDAVICPGNIGVPKMQKDMYGNILDIALL----KFGLMILPSIDL 232
                     .:||.....||||:.:   :....|...:..|...:.||.    |..:.......|
 Frog   401 SVKAGQYDGLVELATICALCNDSSL---DYNESKGVFEKVGEATETALTTLVEKMNVFNTEVRSL 462

  Fly   233 LRHDHEKVAN--------KHYN---SEDKVQVTVHRT-----RDADGHLKLVLLMKGHCEVVIRR 281
            .:.:.....|        |.:.   |.|:..::|:.|     |.|.|:   .:.:||..|.||.|
 Frog   463 SKVERANACNSVIKQLMKKEFTLEFSRDRKSMSVYCTPAKASRAAVGN---KMFVKGAPEGVIDR 524

  Fly   282 CSTFAIRDEELPLDEQLQEIILSLADGLLEAGR-----HVRAFAYKELSDELEFRRFSQVNTGLE 341
            |:...:....:||...:::.||::   :.|.|.     ...|.|.::...:.|........    
 Frog   525 CNYVRVGTTRVPLTPAIKDKILTV---IKEWGTGRDTLRCLALATRDTPPKREEMVLDDAT---- 582

  Fly   342 GGEYKYRDYLAVDTYSLRFLGMIATYNPPRSTIPKAVDRCRAAGIKLIVVTQRKPKMAKALAVDV 406
                |:.||   :| .|.|:|.:...:|||..:..::..||.|||::|::|......|.|:...:
 Frog   583 ----KFVDY---ET-DLTFVGCVGMLDPPRKEVMGSIKLCREAGIRVIMITGDNKGTAIAICRRI 639

  Fly   407 GILPAPSD----TFQAVNLKRMPPTAE---VVDMSQYADEKPQHQRRHIEQLILNQQDLVCAATS 464
            ||.....|    .|.......:|||.:   ....|.:|..:|.|:.:.:|.|           .|
 Frog   640 GIFGEDDDVSRCAFTGREFDDLPPTEQREACKRASCFARVEPTHKSKIVEFL-----------QS 693

  Fly   465 TDQLHWIADACRRLGAVVSVIGGTLHDTPAMRSSHVGVAKYGSAVMCEASADLILLDTSFATLVS 529
            .|:             :.::.|..::|.||::.:.:|:|......:.:.:::::|.|.:|:|:|:
 Frog   694 FDE-------------ITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVA 745

  Fly   530 VVGDSRLLFENLKKALAYCLATNICNILVYLFFFLLGIPLYIHIMDELILAFL--VNLV----PA 588
            .|.:.|.::.|:|:.:.|.:::|:..::.......||:|      :.||...|  ||||    ||
 Frog   746 AVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLP------EALIPVQLLWVNLVTDGLPA 804

  Fly   589 LTLIYEPPEENLMLQMPKVYDDFLLNSRLFFVSHILVGTIEAAAVFMTYFVFM-ADKGFLPRTLV 652
            ..|.:.||:.::|.:.|:...:.|::..|||....:.|.:.||.|....:.|| ||.|  |. :.
 Frog   805 TALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYLAIGGYVGAATVGAAAWWFMYADDG--PE-VT 866

  Fly   653 ALNIAWHDDMLDDITDSFGQEWSSEARRQLECQV------SSLCLMSLAVMQCTNLVLTKTGRAN 711
            ...::......::..|..|          |||::      .::.|..|..::..|.:.:.:...:
 Frog   867 FYQLSHFMQCTEENADFEG----------LECEIFESPVPMTMALSVLVTIEMCNALNSLSENQS 921

  Fly   712 L--LAHGFRNWLLSLAVLLLICLCVQLCIMDSTVCLRLEGTNELHFGHFLLTNCPFMILLVFIET 774
            |  :......|||                  .::||.:    .|||            |::::|.
 Frog   922 LVRMPPWVNIWLL------------------GSICLSM----SLHF------------LILYVEP 952

  Fly   775 TRRYFIRLFP 784
            ....| :|.|
 Frog   953 LPMIF-KLTP 961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45062NP_001286726.1 ATPase-IIC_X-K <13..794 CDD:273445 188/855 (22%)
atp2a1XP_012810385.1 P-type_ATPase_SERCA 5..989 CDD:319778 188/855 (22%)

Return to query results.
Submit another query.