DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG45062 and SERCA

DIOPT Version :9

Sequence 1:NP_001286726.1 Gene:CG45062 / 19835139 FlyBaseID:FBgn0266432 Length:794 Species:Drosophila melanogaster
Sequence 2:NP_726381.1 Gene:SERCA / 49297 FlyBaseID:FBgn0263006 Length:1020 Species:Drosophila melanogaster


Alignment Length:872 Identity:196/872 - (22%)
Similarity:364/872 - (41%) Gaps:183/872 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NMGLACTHAISGIGFAVALACGRNTEVGSM-TDLCFKERSRSRSQKHQKQISYYM-LLVAIVCFI 75
            |:..:.|:..:|....|.:..|.:|.:|.: |::...|..::..|:...:....: .:::::|..
  Fly   206 NILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMSETEEIKTPLQQKLDEFGEQLSKVISVICVA 270

  Fly    76 LLFLTTGF----EHGH-------IVYEVNLSLLIGLTPVYLPFILYWGLRRTRKEMGRKQCHVRN 129
            :..:..|.    .||.       ..:::.::|.:...|..||.::...|....:.|.:|...||:
  Fly   271 VWAINIGHFNDPAHGGSWIKGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRS 335

  Fly   130 LRATCTLGLSTVIVSDLVGTMTKRRMRVSEIFV-------DMGLLSVDNLDVSAQSP-------- 179
            |.:..|||.::||.||..||:|..:|.||.:|:       |...|..: :..|...|        
  Fly   336 LPSVETLGCTSVICSDKTGTLTTNQMSVSRMFIFDKVEGNDSSFLEFE-MTGSTYEPIGEVFLNG 399

  Fly   180 ---------RFIELIRASVLCNDAVICPGNIGVPKMQKDMYGNILDIALL------------KFG 223
                     ...||....::|||:.|   :....|...:..|...:.||:            |.|
  Fly   400 QRIKAADYDTLQELSTICIMCNDSAI---DYNEFKQAFEKVGEATETALIVLAEKLNSFSVNKSG 461

  Fly   224 LMILPSIDLLRHDHEKVANKHYN---SEDKVQVTVHRTRDADGHLKL--VLLMKGHCEVVIRRCS 283
            |....:....|.:.|....|.:.   |.|:..::.:.|......|..  .|.:||..|.|:.||:
  Fly   462 LDRRSAAIACRGEIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKLFVKGAPEGVLERCT 526

  Fly   284 TFAIRDEELPLDEQLQEIILSLADGLLEAGRH-VRAFAYKELS-----DELEFRRFSQVNTGLEG 342
            ...:...::||...|:..||:|. |....||. :|..|.....     ||::.           |
  Fly   527 HARVGTTKVPLTSALKAKILALT-GQYGTGRDTLRCLALAVADSPMKPDEMDL-----------G 579

  Fly   343 GEYKYRDYLAVDTYSLRFLGMIATYNPPRSTIPKAVDRCRAAGIKLIVVTQRKPKMAKALAVDVG 407
            ...|:..|    ..:|.|:|::...:|||..:..::.|||||||::||:|......|:|:...:|
  Fly   580 DSTKFYQY----EVNLTFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIG 640

  Fly   408 ILPAPSDT----FQAVNLKRMPPT---AEVVDMSQYADEKPQHQRRHIEQLILNQQDLVCAATST 465
            :.....||    :.......:.||   |.|.....::..:|||:.:.:|.|              
  Fly   641 VFAEDEDTTGKSYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFL-------------- 691

  Fly   466 DQLHWIADACRRLGAVVSVIGGTLHDTPAMRSSHVGVAKYGSAVMCEASADLILLDTSFATLVSV 530
                      :.:..:.::.|..::|.||::.:.:|:|......:.:::|:::|.|.:|:::||.
  Fly   692 ----------QSMNEISAMTGDGVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVSA 746

  Fly   531 VGDSRLLFENLKKALAYCLATNICNILVYLFFFLLGIPLYIHIMDELILAFL--VNLV----PAL 589
            |.:.|.::.|:|:.:.|.:::||..::.......||:|      :.||...|  ||||    ||.
  Fly   747 VEEGRAIYNNMKQFIRYLISSNIGEVVSIFLTAALGLP------EALIPVQLLWVNLVTDGLPAT 805

  Fly   590 TLIYEPPEENLMLQMPKVYDDFLLNSRLFFVSHILVG------TIEAAAVFMTYFVFMADKGFLP 648
            .|.:.||:.::|.:.|:..|:.|::..||| .::.:|      |:.|||   .:||| :|:|  |
  Fly   806 ALGFNPPDLDIMEKPPRKADEGLISGWLFF-RYMAIGFYVGAATVGAAA---WWFVF-SDEG--P 863

  Fly   649 RTLVALNIAWHDDMLDDITDSFGQEWSSEARRQLECQVSS------LCLMSLAVMQCTNL----- 702
            : |....:..|...|..     |.|:     :.::|::.|      :.|..|..::..|.     
  Fly   864 K-LSYWQLTHHLSCLGG-----GDEF-----KGVDCKIFSDPHAMTMALSVLVTIEMLNAMNSLS 917

  Fly   703 ----VLTKTGRANLLAHGFRNWLL-SLAVLLLICLCVQLCIMDSTVC----LRLEGTNELHFGHF 758
                ::|.....||       ||: |:|:...:...:....:.|||.    |..|.         
  Fly   918 ENQSLITMPPWCNL-------WLIGSMALSFTLHFVILYVDVLSTVFQVTPLSAEE--------- 966

  Fly   759 LLTNCPFMILLVFIETTRRYFIRLFPD 785
            .:|...|.|.:|.::.|.::..|...|
  Fly   967 WITVMKFSIPVVLLDETLKFVARKIAD 993

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45062NP_001286726.1 E1-E2_ATPase <13..132 CDD:278548 24/131 (18%)
Cation_ATPase 190..284 CDD:289987 25/110 (23%)
Cation_ATPase_C 582..777 CDD:295563 55/226 (24%)
SERCANP_726381.1 P-type_ATPase_SERCA 5..989 CDD:319778 194/866 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438591
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 282 1.000 Inparanoid score I96
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42861
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.990

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