DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG45062 and Atpalpha

DIOPT Version :10

Sequence 1:NP_001286726.1 Gene:CG45062 / 19835139 FlyBaseID:FBgn0266432 Length:794 Species:Drosophila melanogaster
Sequence 2:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster


Alignment Length:837 Identity:259/837 - (30%)
Similarity:431/837 - (51%) Gaps:105/837 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SSNMGLACTHAISGIGFAVALACGRNTEVGSMTDLCFKERSRSRSQKHQKQISYYMLLVA----- 70
            :.|:....|:|:.|....|.::||.:|.:|.:..|.  ....:......|:|.:::.|:.     
  Fly   257 TKNLAFFSTNAVEGTAKGVVISCGDHTVMGRIAGLA--SGLDTGETPIAKEIHHFIHLITGVAVF 319

  Fly    71 ------IVCFIL--------LFLTTGFEHGHIVYEVNLSLLIGLTPVYLPFILYWGLRRTRKEMG 121
                  ::.|||        :||.     |.||..|...||..:|..         |..|.|.|.
  Fly   320 LGVTFFVIAFILGYHWLDAVIFLI-----GIIVANVPEGLLATVTVC---------LTLTAKRMA 370

  Fly   122 RKQCHVRNLRATCTLGLSTVIVSDLVGTMTKRRMRVSEIFVDMGLLSVD------NLDVSAQSPR 180
            .|.|.|:||.|..|||.::.|.||..||:|:.||.|:.::.|..::..|      .:.....||.
  Fly   371 SKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPG 435

  Fly   181 FIELIRASVLCNDAVICPGNIGVPKMQKDMYGNILDIALLKFGLMILPSIDLLRHDHEKVANKHY 245
            |..|.|.:.|||.|....|..|||.::|::.|:..:.||||...:.|..:..:|..::|:|...:
  Fly   436 FKALSRIATLCNRAEFKGGQDGVPILKKEVSGDASEAALLKCMELALGDVMNIRKRNKKIAEVPF 500

  Fly   246 NSEDKVQVTVHRTRDADGHLKLVLLMKGHCEVVIRRCSTFAIRDEELPLDEQLQEI--------- 301
            ||.:|.||::|.|.|.:.. :.:|:|||..|.::.||||..|..:|..|||:::|.         
  Fly   501 NSTNKYQVSIHETEDTNDP-RYLLVMKGAPERILERCSTIFINGKEKVLDEEMKEAFNNAYMELG 564

  Fly   302 -----ILSLADGLLEAGRHVRAFAYKELSDELEFRRFSQVNTGLEGGEYKYRDYLAVDTYSLRFL 361
                 :|...|.:|.:.::...|.:.  :|::.|                     .:|  :|||:
  Fly   565 GLGERVLGFCDFMLPSDKYPNGFKFN--TDDINF---------------------PID--NLRFV 604

  Fly   362 GMIATYNPPRSTIPKAVDRCRAAGIKLIVVTQRKPKMAKALAVDVGILPAPSDTFQAVNLKRMPP 426
            |:::..:|||:.:|.||.:||:||||:|:||...|..|||:|..|||:...::|.:.:..:...|
  Fly   605 GLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNETVEDIAQRLNIP 669

  Fly   427 TAE---------VVDMSQYADEKPQHQRRHIEQLILNQQDLVCAATSTDQLHWIADACRRLGAVV 482
            .:|         ||..::..|....    .:::::....::|.|.||..|...|.:.|:|:||:|
  Fly   670 VSEVNPREAKAAVVHGAELRDVSSD----QLDEILRYHTEIVFARTSPQQKLIIVEGCQRMGAIV 730

  Fly   483 SVIGGTLHDTPAMRSSHVGVAK--YGSAVMCEASADLILLDTSFATLVSVVGDSRLLFENLKKAL 545
            :|.|..::|:||::.:.:|||.  .||.|..:| ||:||||.:||::|:.|.:.||:|:||||::
  Fly   731 AVTGDGVNDSPALKKADIGVAMGIAGSDVSKQA-ADMILLDDNFASIVTGVEEGRLIFDNLKKSI 794

  Fly   546 AYCLATNICNILVYLFFFLLGIPLYIHIMDELILAFLVNLVPALTLIYEPPEENLMLQMPK-VYD 609
            ||.|.:||..|..:|.|.|..|||.:..:..|.:....::|||::|.||..|.::|.:.|: .::
  Fly   795 AYTLTSNIPEISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMKRPPRDPFN 859

  Fly   610 DFLLNSRLFFVSHILVGTIEAAAVFMTYFVFMADKGFLPRTLVALNIAWHDDMLDDITDSFGQEW 674
            |.|:||||..:::..:|.|:|||.|..|||.||:.||||:.|..:...|....::|:|||:||||
  Fly   860 DKLVNSRLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPKKLFGIRKMWDSKAVNDLTDSYGQEW 924

  Fly   675 SSEARRQLECQVSSLCLMSLAVMQCTNLVLTKTGRANLLAHGFRNWLLSLAVLLLICLCVQLCIM 739
            :...|:.||....:...:|:.|:|..:|::.||.|.::...|.|||.|:..::....|...|   
  Fly   925 TYRDRKTLEYTCHTAFFISIVVVQWADLIICKTRRNSIFQQGMRNWALNFGLVFETVLAAFL--- 986

  Fly   740 DSTVCLRLEGTNELHFGHFL--LTNCPFMILLVFIETTRRYFIRLFPDSWLELATMY 794
              :.|..:|....::....:  ....||.:.:...:.|||:::|..|..|||..|.|
  Fly   987 --SYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYDETRRFYLRRNPGGWLEQETYY 1041

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45062NP_001286726.1 ATPase-IIC_X-K <13..794 CDD:273445 258/833 (31%)
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 258/835 (31%)

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