DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG45062 and Atp2b3

DIOPT Version :9

Sequence 1:NP_001286726.1 Gene:CG45062 / 19835139 FlyBaseID:FBgn0266432 Length:794 Species:Drosophila melanogaster
Sequence 2:XP_038955468.1 Gene:Atp2b3 / 29599 RGDID:621304 Length:1330 Species:Rattus norvegicus


Alignment Length:822 Identity:176/822 - (21%)
Similarity:305/822 - (37%) Gaps:254/822 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 MGLACTHAISGIGFAVALACGRNTEVGSMTDLC-------------------------------- 46
            |.|:.||.:.|.|..|..|.|.|::.|.:..|.                                
  Rat   260 MLLSGTHVMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKGKQQDGAMDSSQTRAKKQD 324

  Fly    47 -----------------FKERSRSRSQKHQKQIS-----------------YYMLLVAIVCFILL 77
                             .:||.:.::...:|:.|                 ..|..:.::..:|.
  Rat   325 GAVAMEMQPLKSAEGGEMEEREKKKANVPKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLY 389

  Fly    78 FLTTGF-EHGHI-------VYE--------VNLSLLIGLTPVYLPFILYWGLRRTRKEMGRKQCH 126
            |:...| ..|.:       ||.        :.:::|:...|..||..:...|..:.|:|.:....
  Rat   390 FVIETFVVDGRVWLAECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNL 454

  Fly   127 VRNLRATCTLGLSTVIVSDLVGTMTKRRMRVSEIFVDMGLLSVDNLDV-SAQSPRFIELIRASVL 190
            ||:|.|..|:|.:|.|.||..||:|..||.|.:.:  :|......:.. ||.:|:.::|:..::.
  Rat   455 VRHLDACETMGNATAICSDKTGTLTTNRMTVVQSY--LGDTHYKEIPAPSALTPKILDLLVHAIS 517

  Fly   191 CNDA----VICPGNIGVPKMQKDMYGNILDIALLKFGLMILPSIDLLRHDHEKVANK-------- 243
            .|.|    ::.|...|....|   .||..:.|||.|   ||.    |:.|.:.|..:        
  Rat   518 INSAYTTKILPPEKEGALPRQ---VGNKTECALLGF---ILD----LKRDFQPVREQIPEDQLYK 572

  Fly   244 --HYNSEDKVQVTVHRTRDADGHLKLVLLMKGHCEVVIRRCSTFAIRDEEL------PLDEQLQE 300
              .:||..|...||  .|..||..:  |..||..|:::::|:.....:.||      ..|:.:::
  Rat   573 VYTFNSVRKSMSTV--IRMPDGGFR--LFSKGASEILLKKCTNILNSNGELRGFRPRDRDDMVKK 633

  Fly   301 IILSLA-DGLLEAGRHVRAFAYKELSDELEFRRFSQVNTGLEGGEYKYRDYLAVDTYSLRFLGMI 364
            ||..:| |||     .....||::.|             .::..::...:.:..|   |..:.::
  Rat   634 IIEPMACDGL-----RTICIAYRDFS-------------AIQEPDWDNENEVVGD---LTCIAVV 677

  Fly   365 ATYNPPRSTIPKAVDRCRAAGIKLIVVTQRKPKMAKALAVDVGILPAPSDTFQAVNLKRMPPTAE 429
            ...:|.|..:|:|:.:|:.|||.:.:||......|:|:|...||: .|.:.|..:..|..     
  Rat   678 GIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGII-QPGEDFLCLEGKEF----- 736

  Fly   430 VVDMSQYADEKPQHQRRHIEQLILNQ---QDLVCAATSTDQLHW-----IADACRRLGAVVSVIG 486
                    :.:.::::..|||..|::   :..|.|.:|....|.     |.........||:|.|
  Rat   737 --------NRRIRNEKGEIEQERLDKVWPKLRVLARSSPTDKHTLVKGIIDSTTGEQRQVVAVTG 793

  Fly   487 GTLHDTPAMRSSHVGVAK--YGSAVMCEASADLILLDTSFATLVSVVGDSRLLFENLKKALAYCL 549
            ...:|.||::.:.||.|.  .|:.|..||| |:||.|.:|.::|..|...|.:::::.|.|.:.|
  Rat   794 DGTNDGPALKKADVGFAMGIAGTDVAKEAS-DIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQL 857

  Fly   550 ATNICNILVYL--------------------------------------------FFFLLGIPLY 570
            ..|:..::|..                                            |:|:..|...
  Rat   858 TVNVVAVIVAFTGACITQNILMIPRGNLTPISSHFPLPHQPWNAHLLSVCELLSSFYFIDSIYGL 922

  Fly   571 IH------IMDELILA-------------FL--------------VNLV----PALTLIYEPPEE 598
            :|      |..|.::.             ||              |||:    .:|.|..|||.|
  Rat   923 VHLAPVTLIFKETLIGDDKKAGWGQHFCLFLPCEDSPLKAVQMLWVNLIMDTFASLALATEPPTE 987

  Fly   599 NLMLQMPKVYDDFLLNSRLFFVSHILVGTIEAAAVFMTYFVF 640
            :|:|:.|...|..|       :|..::..|...||:....:|
  Rat   988 SLLLRKPYGRDKPL-------ISRTMMKNILGHAVYQLTIIF 1022

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45062NP_001286726.1 E1-E2_ATPase <13..132 CDD:278548 33/199 (17%)
Cation_ATPase 190..284 CDD:289987 29/107 (27%)
Cation_ATPase_C 582..777 CDD:295563 20/77 (26%)
Atp2b3XP_038955468.1 ATPase-IIB_Ca 19..1142 CDD:273668 176/822 (21%)
ATP_Ca_trans_C 1181..1256 CDD:403580
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334705
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.