DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG45062 and Atp13a4

DIOPT Version :9

Sequence 1:NP_001286726.1 Gene:CG45062 / 19835139 FlyBaseID:FBgn0266432 Length:794 Species:Drosophila melanogaster
Sequence 2:NP_001178587.2 Gene:Atp13a4 / 288026 RGDID:1306927 Length:1193 Species:Rattus norvegicus


Alignment Length:900 Identity:169/900 - (18%)
Similarity:301/900 - (33%) Gaps:288/900 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SGIGFAVALACGRNTEVGSMTDLCFKERSRSRSQKHQKQISYYMLLVAIVCFILLFL---TTGFE 84
            ||...||.|..|.||..|.:.          ||..:.|.:::.:...|| .|:|..:   |.|..
  Rat   362 SGTVRAVVLQTGFNTAKGDLV----------RSILYPKPMNFKLYRDAI-RFLLCLVGTATIGMI 415

  Fly    85 HGHIVYEVN-----------LSLLIGLTPVYLPFILYWGLRRTRKEMGRKQCHVRNLRATCTLGL 138
            :...||.::           |.::....|..||..|..|:...::.:.:|.....:.:.....|.
  Rat   416 YTLCVYVLSGEPPEEVVRKALDVITIAVPPALPAALTTGIIYAQRRLKKKGIFCISPQRINVCGQ 480

  Fly   139 STVIVSDLVGTMTKRRMRVSEIFVDMGLLSVD-------NLDVSAQSPRFIELIRASVLCNDAVI 196
            ..::..|..||:|:..:.:      .|::..|       :...|.::..:..|..|...|:..::
  Rat   481 LNLVCFDKTGTLTRGGLDL------WGVVPCDQNGFQAVHSFASGEAVPWGPLCAAMATCHSLIL 539

  Fly   197 CPGNIGVPKMQKDMYGNILDI--------------------ALLKFGLMILPSIDLLRHDHEKVA 241
            ..|.|         .|:.||:                    .:|...:::.|...:.:...|.:|
  Rat   540 LDGTI---------QGDPLDLKMFEATQWEMTVSGDDFHNKEMLAHTMVVKPPDTVGQVPAEGLA 595

  Fly   242 NKHY----NSEDKVQVTVHRTRDADGHLKLVLLMKGHCEVVIRRC------STFAIRDEELPLDE 296
            ..|.    ::..::.|.|..|  ..|.:   ..|||..|.|...|      :||           
  Rat   596 ILHQFPFSSALQRMTVIVQET--GGGRM---AFMKGAPERVASFCQPDTVPTTF----------- 644

  Fly   297 QLQEIILSLADGLLEAGRHVRAFAYKELSDELEFRRFSQVNTGLEGGEYKYRDYLAVDTYSLRFL 361
             :.|:.:....|.     .|.|.|||:|..:..       .|.|      .|:.:..|   |.||
  Rat   645 -ISELQVYTTQGF-----RVIALAYKKLETDCP-------TTTL------MREKVESD---LIFL 687

  Fly   362 GMIATYNPPRSTIPKAVDRCRAAGIKLIVVTQRKPKMAKALAVDVGILPAPS-----DTFQAVNL 421
            |::...|..:......::...:|.|:..::|....:.|..:|...|::....     :..:|.:.
  Rat   688 GLLILENRLKEETRPVLEELISARIRTAMITGDNLQTAITVARKSGMVSEGQKVILVEANEATDS 752

  Fly   422 KRMPPTAEVVDMSQYA------------DEKPQHQR-----------------RH----IEQLIL 453
            .....|.::|:..::.            :|.|::.|                 :|    :.::::
  Rat   753 SSASITWKLVEEKKHGLFGSQDTYINIREEVPENGREGNYHFALSGKSFQVISQHFSSLLPKILI 817

  Fly   454 NQQDLVCAATSTDQLHWIADACRRLGAVVSVIGGTLHDTPAMRSSHVGV------AKYGSA---- 508
            |  ..:.|..|..|...:.:..::|...|.:.|...:|..|::.:||||      |...|.    
  Rat   818 N--GTIFARMSPGQKSSLVEEFQKLDYFVGMCGDGANDCGALKMAHVGVSLSEQEASVASPFTSK 880

  Fly   509 ---VMC------EASADLILLDTSFA--------TLVSVVGDSRLLFENLKKALAYCLATNICNI 556
               :.|      |..|.|:   |||.        :::..||          ..|.|....::.| 
  Rat   881 TPNIECVPHLIKEGRAALV---TSFCMFKYMALYSMIQYVG----------VLLLYWKTNSLSN- 931

  Fly   557 LVYLFFF-------LLGIPLYIHIMDELILAFLVNLVPALTLIYEPPEENLMLQMPKVYDDFLLN 614
              |.|.|       |:|:.:.::..:..::.|.    ||..|| .||   |:|.:       :||
  Rat   932 --YQFLFQDLAITTLIGVTMNLNGANPKLVPFR----PAGRLI-SPP---LLLSV-------ILN 979

  Fly   615 SRLFFVSHILVGTIEAAAVFMTYFVFMADKGFLPRTLVALNIAWHDDMLDDITDSFGQEWSSEAR 679
            ..|....||:                    ||:   ||.                 .|.|.|   
  Rat   980 ILLSLAMHIV--------------------GFI---LVQ-----------------KQPWYS--- 1001

  Fly   680 RQLECQVSSLCLM---SLAVMQCTNLVLTKTGRANLLAHGFRN---WLLSLAVLLLICLCVQLCI 738
                ....|:|.:   |::.:..:..|..|| |:|.....|.|   |.|.    .:.|:.|.|..
  Rat  1002 ----MDYHSVCPVRNESVSALSASPNVPEKT-RSNSTFASFENTTIWFLG----TINCIVVALVF 1057

  Fly   739 MDSTVCLRLEGTNELHFGHFLLT------NCPFMILLVFIETTRRYFIRLFPDSW 787
            .......:...||.:    |:|.      .|.|::.....|..||..:...|..|
  Rat  1058 SKGKPFRQPTYTNYI----FVLVLILQMGVCLFILFADIPELHRRLDLLCTPVLW 1108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45062NP_001286726.1 E1-E2_ATPase <13..132 CDD:278548 27/122 (22%)
Cation_ATPase 190..284 CDD:289987 21/123 (17%)
Cation_ATPase_C 582..777 CDD:295563 42/206 (20%)
Atp13a4NP_001178587.2 P5-ATPase 17..142 CDD:403569
P-type_ATPase_cation 174..1000 CDD:319842 141/774 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334715
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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