DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG45062 and Atp2c1

DIOPT Version :10

Sequence 1:NP_001286726.1 Gene:CG45062 / 19835139 FlyBaseID:FBgn0266432 Length:794 Species:Drosophila melanogaster
Sequence 2:XP_038936657.1 Gene:Atp2c1 / 170699 RGDID:621311 Length:965 Species:Rattus norvegicus


Alignment Length:795 Identity:202/795 - (25%)
Similarity:347/795 - (43%) Gaps:155/795 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SSSNMGLACTHAISGIGFAVALACGRNTEVGSMTDLCFK-----ERSRSRSQKHQ----KQISYY 65
            |.||:....|....|....:.:..|.|:|.|.:    ||     |..::..||..    ||:|:|
  Rat   246 SRSNIAFMGTLVRCGKAKGIVIGTGENSEFGEV----FKMMQAEEAPKTPLQKSMDLLGKQLSFY 306

  Fly    66 MLLVAIVCFILLFLTTGFEHGHIVYE---VNLSLLIGLTPVYLPFILYWGLRRTRKEMGRKQCHV 127
            ..  .|:..|:|   .|:..|..:.|   :::||.:...|..||.::...|......|.:|:..|
  Rat   307 SF--GIIGIIML---VGWLLGKDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRAIV 366

  Fly   128 RNLRATCTLGLSTVIVSDLVGTMTKRRMRVSEIFVDMGL--------------LSVDNLDV--SA 176
            :.|....|||...||.||..||:||..|.|:.|....||              :.||. ||  ..
  Rat   367 KKLPIVETLGCCNVICSDKTGTLTKNEMTVTHILTSDGLHAEVTGVGYNQFGEVIVDG-DVVHGF 430

  Fly   177 QSPRFIELIRASVLCNDAVICPGNIGVPKMQKDMYGNILDIALLKFGLMILPSIDLLRHDHEKVA 241
            .:|....::.|..:||||||....:    |.|...|.::.:| :|.||      |.|:.|:.:.|
  Rat   431 YNPAVSRIVEAGCVCNDAVIRNNTL----MGKPTEGALIALA-MKMGL------DGLQQDYIRKA 484

  Fly   242 NKHYNSEDKVQVT--VHRTRDADGHLKLVLLMKGHCEVVIRRCSTFAIRDEELPLDEQLQEIILS 304
            ...::||.|....  ||||:.....   :..|||..|.||:.|:|:..:.:.|.|.:|.:::...
  Rat   485 EYPFSSEQKWMAVKCVHRTQQDRPE---ICFMKGAYEQVIKYCTTYNSKGQTLALTQQQRDLYQQ 546

  Fly   305 LADGLLEAGRHVRAFAYKELSDELEFRRFSQVNTGLEGGEYKYRDYLAVDTYSLRFLGMIATYNP 369
            ....:..||..|.|.|                 :|.:.|:             |.|||::...:|
  Rat   547 EKAQMGSAGLRVLALA-----------------SGPDLGQ-------------LTFLGLVGIIDP 581

  Fly   370 PRSTIPKAVDRCRAAGIKLIVVTQRKPKMAKALAVDVGILPAPSDTFQAVNLKRMPPTAEVVDMS 434
            ||:.:.:||....|:|:.:.::|....:.|.|:|..:|:.   |.|.|:|:.:.: .|.||..:|
  Rat   582 PRTGVKEAVTTLIASGVSIKMITGDSQETAIAIASRLGLY---SKTSQSVSGEEV-DTMEVQHLS 642

  Fly   435 QYADE-------KPQHQRRHIEQLILNQQDLVCAATSTDQLHWIADACRRLGAVVSVIGGTLHDT 492
            |...:       .|:|:.:.|:.|..|                        |:||::.|..::|.
  Rat   643 QIVPKVAVFYRASPRHKMKIIKSLQKN------------------------GSVVAMTGDGVNDA 683

  Fly   493 PAMRSSHVGVA--KYGSAVMCEASADLILLDTSFATLVSVVGDSRLLFENLKKALAYCLATNICN 555
            .|::::.:|||  :.|:.| |:.:||:||:|..|.|::|.:.:.:.::.|:|..:.:.|:|:|..
  Rat   684 VALKAADIGVAMGQTGTDV-CKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQLSTSIAA 747

  Fly   556 ILVYLFFFLLGIPLYIHIMDELILAFLVNLVPALTLIYEPPEENLMLQMPKVYDDFLLNSRLFFV 620
            :.:.....|:..|..::.|..|.:..:::..||.:|..||.:::::.:.|:.:.|.:|...|  :
  Rat   748 LTLISLATLMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRNWKDSILTKNL--I 810

  Fly   621 SHILVGTIEAAAVFMTYFVF---MADKGFLPR-TLVALNIAWHDDMLDDITDSFGQEWSSEARRQ 681
            ..|||.:|  ..|..|.|||   :.|....|| |.:........||.:.::.      .|:.:..
  Rat   811 LKILVSSI--IIVCGTLFVFWRELRDNVITPRDTTMTFTCFVFFDMFNALSS------RSQTKSV 867

  Fly   682 LE---CQVSSLCLMSLAVMQCTNLV-----LTKTGRANLLAHGFRNWLLS-LAVLLLICLCVQLC 737
            .|   |.....|...|..:....||     |.|.         |:...|| |.:|.|:.|...:|
  Rat   868 FEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKV---------FQTESLSILDLLFLLGLTSSVC 923

  Fly   738 IMDSTVCLRLEGTNE 752
            |: |.:..::|.:.|
  Rat   924 IV-SEIIKKVERSRE 937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45062NP_001286726.1 ATPase-IIC_X-K <13..794 CDD:273445 200/792 (25%)
Atp2c1XP_038936657.1 P-type_ATPase_SPCA 88..930 CDD:319779 200/786 (25%)

Return to query results.
Submit another query.