DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sud1 and Ogfod1

DIOPT Version :10

Sequence 1:NP_733061.1 Gene:sud1 / 19834718 FlyBaseID:FBgn0265189 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001100881.1 Gene:Ogfod1 / 307657 RGDID:1308848 Length:545 Species:Rattus norvegicus


Alignment Length:600 Identity:172/600 - (28%)
Similarity:247/600 - (41%) Gaps:168/600 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PVKPRRKDKDEDGRAEQEDSADQVGEPHRKLLRLGDILETNEVLLNEAYQQPELTKWLQTAWTEE 72
            |.:|.:|.|.:.. ||..|:.                  |.|:          |.|.:..||   
  Rat    11 PARPMKKGKKQVA-AEFSDAV------------------TEEI----------LRKQVAEAW--- 43

  Fly    73 KSQGTKETQTGAQVFSDPFQICLLPGMLEKGQSQALVAEIIQK----VQWSRKQMDLYEFYQSAD 133
             |..|..:.....:..|||..|::|..:   |||..: |.:||    :.:..|..|||:|.||.|
  Rat    44 -SCRTPFSHEAIALDMDPFLHCVIPNFI---QSQDFL-EGLQKELLSLDFHEKYNDLYKFQQSDD 103

  Fly   134 LS-----NMPACRLLTNFLQVLRKQVRPWLEKVTNLKLD-YVSASCSMYTCGDYLLVHDDLLKDR 192
            |.     ::.|.|.|      :.:..|.||.||:.:.|: .|..||:.|...|.||.|||.|:.|
  Rat   104 LKKRKEPHISALRTL------MFEDFRAWLSKVSGIDLEATVDMSCAKYEFTDALLCHDDELEGR 162

  Fly   193 QVAFIYYLSPWEGAEEWTDEQGGCLEIFGSDDQCFPQFPVQRKIAPKDNQFAFFKVGSRSFHQVG 257
            ::|||.||.|     .|..:.||.|:::.:|:...|: .:.:.:.|..|:..||:|...|||||.
  Rat   163 RIAFILYLVP-----SWDRDLGGTLDLYDTDEHLQPK-QIVKSLVPAWNKLVFFEVSPVSFHQVS 221

  Fly   258 EVTTFDYPRLTINGWFHGDTNEAFVADSLRAFPRLNYLQPDGLNRPP--------LGLFLNNVYL 314
            ||.:.:..||:|:|||||        .||...|  .|.:|. :.|.|        |..::|..||
  Rat   222 EVLSEELTRLSISGWFHG--------PSLARPP--TYFEPP-VPRSPHIPQDHEILYEWINPAYL 275

  Fly   315 KGATRRSIQKRIEENSEICLYEFFKREKFELARSQLLADSDTLKWRRQGPANAHNYEVLDLTTAR 379
            :...:..||:..||.|||.|.||.|.|||......|  :...::|:..||.|...||....:...
  Rat   276 EMDYQMQIQEEFEERSEILLKEFLKPEKFAKVCEAL--EKGDVEWKSHGPPNKRFYEKAKESNLP 338

  Fly   380 GTILELLQLFRSHAMFDLLRDFTDLDL-----------------------AGT------------ 409
            ..:.|.:.||.|.|||.||.:||.|.|                       .||            
  Rat   339 DVLKECMGLFHSEAMFLLLSNFTGLKLHFLAPSEDDETEDKGEGETASAAGGTEEGTSQSPPGPE 403

  Fly   410 ----------------------------DAESPTCSVELQRWSHGNYTVLGDGLTSEENTLDLVY 446
                                        ::..|.|..||:||..|:||::.|. :..|..|||..
  Rat   404 DNQAAVGSHSQENGEQADPEPQEDEAKKESSVPMCQGELRRWKTGHYTLVHDN-SKTEFALDLFL 467

  Fly   447 YLNAAEGAAVITYLAPDAEMPTAKAPTDGRRSDYDDEEEDDSVLLTITPVDNALNIVYRCEGTTK 511
            |. ..||                ..|..|..:.|..:.||:. ||.:.|.:|||.:|||...|.:
  Rat   468 YC-GCEG----------------WEPEYGGFTSYIAKGEDEE-LLIVNPENNALALVYRDRETLR 514

  Fly   512 FTKYVS------RNT 520
            |.|:::      |||
  Rat   515 FVKHINHRSLEQRNT 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sud1NP_733061.1 2OG-FeII_Oxy_4 172..274 CDD:433386 40/101 (40%)
Ofd1_CTDD 300..536 CDD:402326 78/297 (26%)
Ogfod1NP_001100881.1 2OG-FeII_Oxy_4 141..238 CDD:433386 40/102 (39%)
2OG-FeII_Oxy 261..545 CDD:473886 76/289 (26%)

Return to query results.
Submit another query.