DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ring1 and Sce

DIOPT Version :10

Sequence 1:NP_033092.3 Gene:Ring1 / 19763 MGIID:1101770 Length:406 Species:Mus musculus
Sequence 2:NP_477509.1 Gene:Sce / 43327 FlyBaseID:FBgn0003330 Length:435 Species:Drosophila melanogaster


Alignment Length:492 Identity:205/492 - (41%)
Similarity:242/492 - (49%) Gaps:153/492 - (31%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MTTPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMTTKECL 65
            ||:...|.|  ||||||||||.|.|||.|.|.||||||||||||||||||||||||.||||||||
  Fly     1 MTSLDPAPN--KTWELSLYELQRKPQEVITDSTEIAVSPRSLHSELMCPICLDMLKKTMTTKECL 63

Mouse    66 HRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAHQDRVLIRLSR 130
            |||||||||||||||||||||||||||||||||.|||||.||||||||||||||.|::|:.:.::
  Fly    64 HRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRADPNFDLLISKIYPSREEYEAIQEKVMAKFNQ 128

Mouse   131 LHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTATMSGGEGEPGEGEGDGEDVSSDSAPDSA 195
            ..:||||.:||.||:::|:.:|.||.|          |..||.|..|.|.|:|       |.:.|
  Fly   129 TQSQQALVNSINEGIKLQSQNRPQRFR----------TKGGGGGGGGGGNGNG-------AANVA 176

Mouse   196 PGPAPKRPRGAGAGASS----------------------------VGTGGGAAGGACGGAGSEDS 232
            ..|||..|...|..||:                            .||...:|..:...|....|
  Fly   177 APPAPGAPTAVGRNASNQMHVHDTASNDSNSNTNSIDRENRDPGHSGTSAASAITSASNAAPSSS 241

Mouse   233 GDRGGTLGGGTL------GPPSPPGAPSP------------------------------------ 255
            .:.|.:.....:      .|||....|||                                    
  Fly   242 ANSGASTSATRMQVDDASNPPSVRSTPSPVPSNSSSSKPKRAMSVLTSERSEESESDSQMDCRTE 306

Mouse   256 --------PEPGG------EIELVFRPHP--------LLVEKGEYCQTRYVKTTGNATVDHLSKY 298
                    .|..|      ||||||:|||        |:....|.| .||:|||.||||||||||
  Fly   307 GDSNIDTEGEGNGELGINDEIELVFKPHPTEMSADNQLIRALKENC-VRYIKTTANATVDHLSKY 370

Mouse   299 LALRIALERRQQQETTEPGGPGGGASDTGGPDGGGGERGVAGGGEGPEEPALPSLEGVSEKQYTI 363
            ||:|:.|:.                    |.|                   ||  |......:.|
  Fly   371 LAMRLTLDL--------------------GAD-------------------LP--EACRVLNFCI 394

Mouse   364 YIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYA 400
            |:||.......|||:.||..||:|||||::|:|:.|:
  Fly   395 YVAPQPQQLVILNGNQTLHQVNDKFWKVNKPMEMYYS 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ring1NP_033092.3 Necessary for transcriptional repression 30..234 122/231 (53%)
RING-HC_RING1 43..112 CDD:438397 65/68 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 151..263 36/195 (18%)
Nuclear localization signal. /evidence=ECO:0000250 201..204 0/2 (0%)
Necessary for interaction with CBX2. /evidence=ECO:0000269|PubMed:9312051 230..406 65/235 (28%)
RAWUL_RING1 261..400 CDD:340686 54/146 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..354 4/44 (9%)
SceNP_477509.1 COG5222 <10..154 CDD:227547 113/143 (79%)
RING_Ubox 41..110 CDD:473075 65/68 (96%)
RAWUL_RING1_like 326..431 CDD:340606 54/146 (37%)

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