DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EIF4A2 and inf-1

DIOPT Version :10

Sequence 1:NP_001958.2 Gene:EIF4A2 / 1974 HGNCID:3284 Length:407 Species:Homo sapiens
Sequence 2:NP_001022623.1 Gene:inf-1 / 175966 WormBaseID:WBGene00002083 Length:402 Species:Caenorhabditis elegans


Alignment Length:390 Identity:281/390 - (72%)
Similarity:333/390 - (85%) Gaps:1/390 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    18 MDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTG 82
            :|.||:||.|::::|::||||.|||.||||||.:|||||||||:|||:||..|.|||||||||||
 Worm    14 VDADGLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTG 78

Human    83 KTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQK 147
            |||||::||||:::.|....||||:|||||||||||||:.|||:|:......|||||:||::.:|
 Worm    79 KTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRK 143

Human   148 LQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVL 212
            |:| ..|:||||||||.||:||..|....|||||||||||||||||||||||:|:.:...:||||
 Worm   144 LEA-GIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVL 207

Human   213 LSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAV 277
            ||||||::||:||.:|||:||||||||:|||||||:||||||:::|||.|.|||||..:.:||||
 Worm   208 LSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAV 272

Human   278 IFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQV 342
            ||.|||||||.|||||....||||.|||||||.|||.|||||||||||||||||:||||||||||
 Worm   273 IFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQV 337

Human   343 SLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
            |||||||||:|||||||||||.|||||||||||||||.|.|.|::||::|.|.:||||.::||||
 Worm   338 SLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402

Human   408  407
             Worm   403  402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EIF4A2NP_001958.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 1/3 (33%)
DEAD-like_helicase_N 21..407 CDD:475120 278/385 (72%)
Q motif 33..61 21/27 (78%)
DEAD box 183..186 2/2 (100%)
inf-1NP_001022623.1 DEAD-like_helicase_N 5..402 CDD:475120 279/388 (72%)

Return to query results.
Submit another query.