DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rfng and fng

DIOPT Version :10

Sequence 1:NP_033079.1 Gene:Rfng / 19719 MGIID:894275 Length:332 Species:Mus musculus
Sequence 2:NP_524191.1 Gene:fng / 40314 FlyBaseID:FBgn0011591 Length:412 Species:Drosophila melanogaster


Alignment Length:400 Identity:155/400 - (38%)
Similarity:199/400 - (49%) Gaps:81/400 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 RARRVLCRACLALAAVLAVLLLLPLPLPLP---LPR----------------------------- 35
            |.:|:|....||:|.|...|||.......|   :|.                             
  Fly    12 RFKRILQAMMLAVAVVYMTLLLYQSAYGYPGIQVPHSQVDALASEAVTTHRDQLLQDYVQSSTPT 76

Mouse    36 -----APAPDPDRV-------------------PTRSLTLE-------GDRL------------Q 57
                 |||..|..|                   ||.:|..|       |:.|            |
  Fly    77 QPGAGAPAASPTTVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141

Mouse    58 P-----DDVFIAVKTTRKNHGPRLRLLLRTWISRAPRQTFIFTDGDDPELQMLAGGRMINTNCSA 117
            |     ||:||:||||:..|..||.|:::||...|..||:.|||.||...|....|.:|||.||.
  Fly   142 PPVTELDDIFISVKTTKNYHDTRLALIIKTWFQLARDQTWFFTDTDDHYYQEKTKGHLINTKCSQ 206

Mouse   118 VRTRQALCCKMSVEYDKFLESGRKWFCHVDDDNYVNPKSLLHLLSTFSSNQDIYLGRPSLDHPIE 182
            ...|:|||||||.|.|.|||||:|||||.|||||||...|:.||..:|.:.|.|||:||:..|:|
  Fly   207 GHFRKALCCKMSAELDVFLESGKKWFCHFDDDNYVNVPRLVKLLDEYSPSVDWYLGKPSISSPLE 271

Mouse   183 ATERVQGGGTSNTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERVRLPDDCTVGYIVEG 247
            .....:...|:..:.||||||||||||||.|.|||.|.|..|.|:|..:::|.|||.|:|:|:|.
  Fly   272 IHLDSKNTTTNKKITFWFATGGAGFCLSRALTLKMLPIAGGGKFISIGDKIRFPDDVTMGFIIEH 336

Mouse   248 LLGARLLHSPLFHSHLENLQRLPSGAILQQVTLSYGGPENPHNVVNVAGSFNIQQDPTRFQSVHC 312
            ||...|.....||||||.::.:.......||:.||...:|..||:.|.| |:::.||.||.|:||
  Fly   337 LLKVPLTVVDNFHSHLEPMEFIRQDTFQDQVSFSYAHMKNQWNVIKVDG-FDMKTDPKRFYSLHC 400

Mouse   313 LLYPDTHWCP 322
            .|:|...:||
  Fly   401 QLFPYFSFCP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RfngNP_033079.1 Fringe 56..306 CDD:367085 124/266 (47%)
fngNP_524191.1 Fringe 145..394 CDD:367085 121/249 (49%)

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