DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rfng and CG18558

DIOPT Version :10

Sequence 1:NP_033079.1 Gene:Rfng / 19719 MGIID:894275 Length:332 Species:Mus musculus
Sequence 2:NP_608720.2 Gene:CG18558 / 33482 FlyBaseID:FBgn0031469 Length:588 Species:Drosophila melanogaster


Alignment Length:248 Identity:65/248 - (26%)
Similarity:102/248 - (41%) Gaps:40/248 - (16%)


- Green bases have known domain annotations that are detailed below.


Mouse     7 VLCRACLALAA-VLAVLL--LLPLPLPLPLPRAPAPDP-DRVPTRSLTLEGDRLQPDDVFI--AV 65
            ||...|.|:.. ||..||  |.|.....|||...:|:| .::.:|.|..:..::....|.|  .|
  Fly   262 VLYPYCRAMQMYVLEFLLYHLRPYGHLTPLPELRSPNPLTKIASRPLNDQLAKMMYRSVRIICLV 326

Mouse    66 KTTRKNHGPRLRLLLRTWISRAPRQTFIFTDGDDPELQMLAGGRMINTNCSAVRTRQALCCKMSV 130
            .|..|.:....|.:..||.....|..:.   |..|. ..::|..::..|.|  .||..|..|...
  Fly   327 LTWPKKYMSGARAISETWGRHCNRVIYY---GSFPG-TTISGLEIVGLNAS--DTRSKLWGKTKA 385

Mouse   131 EY-DKFLESGRK--WFCHVDDDNYVNPKSLLHLLSTFSSNQDIYLGRPSLDHPIEATERVQGGGT 192
            .: ..:...|.:  ||...|||.|...:::..||..:|.:..||.|.|           .:.|.|
  Fly   386 AFRHAYRNYGHEVDWFYKADDDTYAVMENMRKLLKPYSPSNPIYFGSP-----------FKLGST 439

Mouse   193 SNTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERVRLPDDCTVGYIV 245
                  .:.:||||:.||:. |:::   .:||:    ||..:..|..|..|::
  Fly   440 ------LYMSGGAGYVLSKS-AVEL---LNLGA----AENCQPGDQGTEDYVM 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RfngNP_033079.1 Fringe 56..306 CDD:367085 48/195 (25%)
CG18558NP_608720.2 Galactosyl_T <400..>458 CDD:473923 22/78 (28%)

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