Sequence 1: | NP_033076.2 | Gene: | Ret / 19713 | MGIID: | 97902 | Length: | 1115 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651349.1 | Gene: | Cad96Ca / 43026 | FlyBaseID: | FBgn0022800 | Length: | 773 | Species: | Drosophila melanogaster |
Alignment Length: | 304 | Identity: | 131/304 - (43%) |
---|---|---|---|
Similarity: | 197/304 - (64%) | Gaps: | 12/304 - (3%) |
- Green bases have known domain annotations that are detailed below.
Mouse 717 KWEFPRKNLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASQSELRDLLSEFNLLK 781
Mouse 782 QVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRDSRKIGPAYVSGGGSRNSSSLDHPDER 845
Mouse 846 VLTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKKS 910
Mouse 911 KGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPD 975
Mouse 976 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKSRDYLDL 1019 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ret | NP_033076.2 | Cadherin | 173..262 | CDD:278457 | |
PTKc_RET | 724..1013 | CDD:173631 | 123/289 (43%) | ||
Pkinase_Tyr | 725..1006 | CDD:285015 | 121/281 (43%) | ||
Inhibitors binding. /evidence=ECO:0000250 | 806..808 | 1/1 (100%) | |||
Cad96Ca | NP_651349.1 | Cadherin_repeat | 65..164 | CDD:206637 | |
STYKc | 470..741 | CDD:214568 | 121/281 (43%) | ||
PTKc | 474..742 | CDD:270623 | 120/278 (43%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0200 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |