DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rem1 and Rgk1

DIOPT Version :10

Sequence 1:NP_033073.1 Gene:Rem1 / 19700 MGIID:1097696 Length:297 Species:Mus musculus
Sequence 2:NP_725875.3 Gene:Rgk1 / 14462605 FlyBaseID:FBgn0264753 Length:1379 Species:Drosophila melanogaster


Alignment Length:334 Identity:107/334 - (32%)
Similarity:152/334 - (45%) Gaps:79/334 - (23%)


- Green bases have known domain annotations that are detailed below.


Mouse    23 LSSRGHQPGRLCTAPSAPSQHPRLGQSVSLNPPV-RKPSPAQDGWSSESSDSEGSWEALYRVVLL 86
            |.||..:......:.::.::|....|.:|....| .:.|.|....||.|:...|.    |||::|
  Fly  1066 LKSRRSRSNNSVASSNSSTEHLTTQQQLSAPASVSARTSLASSRESSTSNPGNGP----YRVLML 1126

Mouse    87 GDPGVGKTSLASLFAEKQ-----DRDPHEQLGGVYERTLSV--DGEDTTLVVMDTWEAEKLDESW 144
            |.|.|||:||.|.|...:     |....::.|   |:.:||  .||::.|:.:|....|     .
  Fly  1127 GGPAVGKSSLVSQFMTSEYLHAYDTSIDDESG---EKAVSVLLSGEESELIFIDHGYTE-----M 1183

Mouse   145 CQESCL--QAGSAYVIVYSIADRSSFESASELRIQLRRTHQ-ANHVPIILVGNKADLARCREVSV 206
            ..:.||  .....|.::||.|||||| |.:|..:|:..|:| .....:|||.|||||||.|.|:.
  Fly  1184 TPDECLTNYDPHGYCVIYSAADRSSF-SVAEQVLQVLWTNQNIAQKAVILVSNKADLARSRLVTS 1247

Mouse   207 EEGRACAVVFDCKFIETSATLQHNVTELFEGVVRQLRLRRQD----------------------- 248
            |||:|.|..:||||||||..:.|||.||..|::.|:||:.::                       
  Fly  1248 EEGKAMATAYDCKFIETSVGINHNVDELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSP 1312

Mouse   249 ------NA---------APETP------SPRR----RASLGQRARRFLARLTARSARRRALKARS 288
                  ||         |..||      |||:    |.|...:.:..|.|:..|.       ::|
  Fly  1313 LNAGCLNANTPLGPLGEAVATPPGSAQSSPRKYRGSRTSTSLKVKGLLGRVWTRD-------SKS 1370

Mouse   289 KSCHNLAVL 297
            |||.||.||
  Fly  1371 KSCENLHVL 1379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rem1NP_033073.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..73 12/50 (24%)
RGK 81..297 CDD:206715 92/273 (34%)
Calmodulin-binding 267..286 3/18 (17%)
Rgk1NP_725875.3 DUF2967 16..899 CDD:402654
P-loop containing Nucleoside Triphosphate Hydrolases 1121..1379 CDD:476819 92/273 (34%)
Blue background indicates that the domain is not in the aligned region.

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