DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rbl2 and Rbf2

DIOPT Version :9

Sequence 1:NP_035380.3 Gene:Rbl2 / 19651 MGIID:105085 Length:1135 Species:Mus musculus
Sequence 2:NP_524372.1 Gene:Rbf2 / 41941 FlyBaseID:FBgn0038390 Length:783 Species:Drosophila melanogaster


Alignment Length:1130 Identity:228/1130 - (20%)
Similarity:385/1130 - (34%) Gaps:420/1130 - (37%)


- Green bases have known domain annotations that are detailed below.


Mouse    23 EEDGDAADRAQPAGSPSHQIQQRFEELCSRLNMDEAARAEAWSSYR---SMSESYTLEGNDLHWL 84
            |.:|:|           ..:.:||...|.:|.::...:..|.|:|.   :::...|.|.:...||
  Fly     5 EVEGEA-----------ETLVRRFSVSCEQLELEARIQQSALSTYHRLDAVNGLSTSEADAQEWL 58

Mouse    85 ACALYVACRKS-VPTVSKGTAEGN---------YVSLTRILRCSEQSLIEFFNKMKKWEDMANLP 139
            .||:|...::| :..:.:...|.|         .|||||:||..:.::.:|..:|:.|..:....
  Fly    59 CCAVYSELQRSKMRDIRESINEANDSVAKNCCWNVSLTRLLRSFKMNVSQFLRRMEHWNWLTQNE 123

Mouse   140 PHFRERTERLERNFTVSAVIFKKYEPIFQDIFKYP-QEEQPRQQRGRKQRRQPCTTSEIFHFCWV 203
            ..|:...|.|.....:::.:.:.|:.||:.:|.:| :...|    |.....|     .::.|.|:
  Fly   124 NTFQLEVEELRCRLGITSTLLRHYKHIFRSLFVHPGKGADP----GAANHYQ-----ALYEFGWL 179

Mouse   204 LFIYAKGNFPMIS-DDLVNSYHLLLCALDLVYGNALQCSNRKELVNPNFKGLSEDCHPKDSKASS 267
            ||:..:...|..: .:|:|...:|:|.:||::.|||:.. |..::...|.|:     ||:.....
  Fly   180 LFLVIRNELPGFAITNLINGCQVLVCTMDLLFVNALEVP-RSVVIRREFSGV-----PKNWDTED 238

Mouse   268 DPPCVIEKLCSLHDGL-----VLEAKGI---KEHFWKPYIRKLFEKKLLKGKEENLTGFLEPGNF 324
            ..|.::.|. |:.:.|     .|.|||:   |..|:...:..|:....|.|.:.::...::.|..
  Fly   239 FNPILLNKY-SVLEALGELIPELPAKGVVQMKNAFFHKALIMLYMDHSLVGDDTHMREIIKEGML 302

Mouse   325 GESFKAVNKAYEEYVLAAGNLDERVFLG-EDAEEEVGTLSRCLSAASGTESAERTQMRDILQQHL 388
            ..:.:.:|:.|...|.....:||||.|. :.|.|..|...:....|..|.|              
  Fly   303 DINLENLNRKYTNQVADISEMDERVLLSVQGAIETKGDSPKSPQLAFQTSS-------------- 353

Mouse   389 DKSKALRVCTPLTGVRYVQENSPCVTPVSTAAHSLSRLHTMLSGLRNAPSEK--------LERIL 445
                                 ||....:||  |.|. ....||.::..|.::        |::.|
  Fly   354 ---------------------SPSHRKLST--HDLP-ASLPLSIIKAFPKKEDADKIVNYLDQTL 394

Mouse   446 RSCSRDPTQAIADRLKEMYEIYSQHFQPDENFSNCAKEIANKHFRFAEMLYYKVLESVIEQEQKR 510
            ...:|..|.|:.|.|.                    .|::.|.||.|..||||.|:.::..|..:
  Fly   395 EEMNRTFTMAVKDFLD--------------------AELSGKRFRQARGLYYKYLQKILGPELVQ 439

Mouse   511 LGDMDLSGVLEHDAFHRSLLACCLEVVAFSHKP--PG-NFPFIAEIFDVPHYHFYKVIEVFIRAE 572
            ...:.:..:::......:|||||||:....|..  .| .|||:...|.:..|.|.|::|:.:|.:
  Fly   440 KPQLKIGQLMKQRKLTAALLACCLELALHVHHKLVEGLRFPFVLHCFSLDAYDFQKILELVVRYD 504

Mouse   573 DG-LCREVVKHLNQIEEQILDHLAWKTKSPLWDRIRDNENRVPTCEEVMPPQNLERTDEIYIAGS 636
            .| |.||::|||:.:||..||.|.::..|.||..:   ..|:|..:||    :.|..|:      
  Fly   505 HGFLGRELIKHLDVVEEMCLDSLIFRKSSQLWWEL---NQRLPRYKEV----DAETEDK------ 556

Mouse   637 PLTPRRVGEVRADAGGLGRSITSPTTLYDRYSSPTVSTTRRRLFENDSPSEGSTSGRIPPQPLVN 701
                                                        ||.|                 
  Fly   557 --------------------------------------------ENFS----------------- 560

Mouse   702 AVPVQNVPGETVSVTPVPGQTLVTMATATVTANNGQTVTIPVQGIANENGGITFFPVQVNVGGQA 766
                                                                             
  Fly   561 ----------------------------------------------------------------- 560

Mouse   767 QAVAGSIQPLSAQALAGSLSSQQVTGTTLQVPGPVAIQQISPGGQQQNPGQPLTSSSIRPRKTSS 831
                                    ||                                     ||
  Fly   561 ------------------------TG-------------------------------------SS 564

Mouse   832 LALFFRKVYYLAGVRLRDLCIKLDISDELRKKIWTCFEFSI-IQCTELMMDRHLDQLLMCAIYVM 895
            :.|  ||.|.||..||..||..|.:.|.. .:||...|.|. ::.:.|:.:|||||||:|||::.
  Fly   565 ICL--RKFYGLANRRLLLLCKSLCLVDSF-PQIWHLAEHSFTLESSRLLRNRHLDQLLLCAIHLH 626

Mouse   896 AKVTKEDRSFQNIMRCYRTQPQARSQVYRSVLIKGKRRNSGSSESRSHQNSPTELNTDRASRDSS 960
            .::.|...:|..|::.||.||..|...||.|.:       |:.::                    
  Fly   627 VRLEKLHLTFSMIIQHYRRQPHFRRSAYREVSL-------GNGQT-------------------- 664

Mouse   961 PVMRSNSTLPVPQPSSAPPTPTRLTGASSDVEEEERGDLIQFYNNIYRKQIQAF----------- 1014
                                                .|:|.|||::|.:.:..:           
  Fly   665 ------------------------------------ADIITFYNSVYVQSMGNYGRHLECAQTRK 693

Mouse  1015 AMKYSQAN----AQTDTPPLSPYPFVRTGSPRRVQLSQ-----SHPIYISPHNNEAMPSPREKIF 1070
            :::.||:|    .:|.:..||....:...||...::.|     |||    |.:..|.|       
  Fly   694 SLEESQSNVGILTETTSNELSMRANISISSPPPPRVCQSGSCSSHP----PSSPAASP------- 747

Mouse  1071 YYFSNSPS-KRLREINSMIRTGETP 1094
            ....:||: ||....|.::|..:.|
  Fly   748 LSLQSSPNVKRAASSNDLMREIKRP 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbl2NP_035380.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43 3/19 (16%)
DUF3452 101..233 CDD:288762 33/142 (23%)
Pocket, binds E1A 414..1021 117/630 (19%)
Domain A 414..613 58/210 (28%)
RB_A 414..606 CDD:280101 58/203 (29%)
Spacer 614..824 10/209 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 661..698 3/36 (8%)
Domain B 825..1021 48/207 (23%)
RB_B 831..1011 CDD:280100 46/180 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 930..994 1/63 (2%)
Rbf2NP_524372.1 DUF3452 83..210 CDD:288762 31/135 (23%)
RB_A 380..536 CDD:280101 49/175 (28%)
CYCLIN 564..679 CDD:294043 46/180 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837301
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1010
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46367
OrthoDB 1 1.010 - - D113612at2759
OrthoFinder 1 1.000 - - FOG0002362
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13742
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.820

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