DRSC/TRiP Functional Genomics Resources

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Protein Alignment EGR4 and MIG1

DIOPT Version :10

Sequence 1:NP_001956.4 Gene:EGR4 / 1961 HGNCID:3241 Length:486 Species:Homo sapiens
Sequence 2:NP_011480.1 Gene:MIG1 / 852848 SGDID:S000003003 Length:504 Species:Saccharomyces cerevisiae


Alignment Length:116 Identity:41/116 - (35%)
Similarity:56/116 - (48%) Gaps:24/116 - (20%)


- Green bases have known domain annotations that are detailed below.


Human   349 TPFPQAKAR--------RKGRRGGKCSTRCFCPRPHAKAFACPVESCVRSFARSDELNRHLRIHT 405
            :|:|..:..        ::.:...|.:.:...||||    |||:  |.|:|.|.:...||:||||
Yeast     3 SPYPMTQVSNVDDGSLLKESKSKSKVAAKSEAPRPH----ACPI--CHRAFHRLEHQTRHMRIHT 61

Human   406 GHKPFQCRI--CLRNFSRSDHLTTHVRTHTGEKPFACDVCGRRFARSDEKK 454
            |.||..|..  |::.|||||.||.|.|.||...|        |..|..:||
Yeast    62 GEKPHACDFPGCVKRFSRSDELTRHRRIHTNSHP--------RGKRGRKKK 104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EGR4NP_001956.4 PHA03247 <74..339 CDD:223021
zf-C2H2 380..404 CDD:395048 10/23 (43%)
C2H2 Zn finger 382..404 CDD:275368 9/21 (43%)
COG5048 408..>466 CDD:227381 20/49 (41%)
C2H2 Zn finger 412..432 CDD:275368 11/21 (52%)
C2H2 Zn finger 440..460 CDD:275368 4/15 (27%)
MIG1NP_011480.1 COG5048 5..>413 CDD:227381 40/114 (35%)
C2H2 Zn finger 40..60 CDD:275368 9/21 (43%)
C2H2 Zn finger 68..90 CDD:275368 11/21 (52%)
Blue background indicates that the domain is not in the aligned region.

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