DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EGR4 and egr4

DIOPT Version :10

Sequence 1:NP_001956.4 Gene:EGR4 / 1961 HGNCID:3241 Length:486 Species:Homo sapiens
Sequence 2:NP_001107925.1 Gene:egr4 / 795099 ZFINID:ZDB-GENE-080204-90 Length:352 Species:Danio rerio


Alignment Length:520 Identity:151/520 - (29%)
Similarity:199/520 - (38%) Gaps:208/520 - (40%)


- Green bases have known domain annotations that are detailed below.


Human     1 MLHLSEFSEPDAL----LVKSTEGCCAEPSAELPRLPARDAPAATGYPGAGDFLSWALNSCGASG 61
            ||:..:||..|.|    |.:....|  :|.|....|..:..|...|:|           .|...|
Zfish     1 MLNTVDFSALDLLCAQTLPQPAPHC--QPDAACGLLKPKAEPVDAGFP-----------DCSCDG 52

Human    62 DLADSCFLEGPAPTPPPGLSYSGSFFIQAVPEHPHDPEALFNLMSGILGLAP-FPGPEAAASRSP 125
                         .||..|:|:|||:.::   .|...:||.|:::.|:|::. |.|...|.:.|.
Zfish    53 -------------FPPSPLTYTGSFYTES---GPCSTDALLNILTEIVGISDNFCGNSRAGALSR 101

Human   126 LDAPFPAGSDALLPGPPDLYSPDLGAAPFPEAFWEASPCAGAPSQCLYEPQLSPPDVKPGLRAPP 190
            .::....||                                                        
Zfish   102 QESLLSTGS-------------------------------------------------------- 110

Human   191 ASPALDAVSAFKGPYAPWELLSVGAPGN-CGSQGDYQAAPEARFPVIGTKIEDLLSISCPAELPA 254
                                 |:|:|.: |....|                          |...
Zfish   111 ---------------------SLGSPESLCNDSSD--------------------------EFAD 128

Human   255 VPANRLYPSGAYDAFPLAPGDLGEGAEGLPGLLTPPSGEGGSSGDGGEFLAST-QPQ-------- 310
            ..|.:|       |||....:.|.            |..||...||  |..|: :|.        
Zfish   129 TSAQQL-------AFPAIKSEFGS------------SCSGGDLFDG--FCTSSHEPSDLDDIIDL 172

Human   311 LSPLGLRSAAAADF---PKPLVADIPGSSGVAAPPVPPPPP------TPFPQA------------ 354
            |||||..:.:..|.   .:||...:         ||.|.|.      ..||.|            
Zfish   173 LSPLGPETDSVLDTWIKQEPLDFQL---------PVAPAPSHENSLYISFPNAFGLADALDSLLA 228

Human   355 ---KARRKGRRGGKCSTRCFCPRPHAKAFACPVESCVRSFARSDELNRHLRIHTGHKPFQCRICL 416
               .|:|...|..|.:.|       .|.|:||||||.|.|:||||||||:||||||||||||:||
Zfish   229 TNTHAQRSKPRARKGAAR-------EKPFSCPVESCERRFSRSDELNRHVRIHTGHKPFQCRVCL 286

Human   417 RNFSRSDHLTTHVRTHTGEKPFACDVCGRRFARSDEKKRHSKVHLKQKARAEERLKGLGFYSLGL 481
            |.||||||||||:|||||||||:||||.||||||||:|||.:|||||:.|.:::.:.||..:..|
Zfish   287 RCFSRSDHLTTHMRTHTGEKPFSCDVCARRFARSDERKRHMRVHLKQRERMQQKTELLGACAFSL 351

Human   482  481
            Zfish   352  351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EGR4NP_001956.4 PHA03247 <74..339 CDD:223021 47/278 (17%)
zf-C2H2 380..404 CDD:395048 18/23 (78%)
C2H2 Zn finger 382..404 CDD:275368 17/21 (81%)
COG5048 408..>466 CDD:227381 48/57 (84%)
C2H2 Zn finger 412..432 CDD:275368 16/19 (84%)
C2H2 Zn finger 440..460 CDD:275368 15/19 (79%)
egr4NP_001107925.1 C2H2 Zn finger 252..274 CDD:275368 17/21 (81%)
COG5048 278..>344 CDD:227381 49/65 (75%)
C2H2 Zn finger 282..302 CDD:275368 16/19 (84%)
zf-H2C2_2 294..319 CDD:463886 21/24 (88%)
C2H2 Zn finger 310..330 CDD:275368 15/19 (79%)

Return to query results.
Submit another query.