DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EGR4 and odd

DIOPT Version :9

Sequence 1:NP_001956.4 Gene:EGR4 / 1961 HGNCID:3241 Length:486 Species:Homo sapiens
Sequence 2:NP_722922.1 Gene:odd / 33583 FlyBaseID:FBgn0002985 Length:392 Species:Drosophila melanogaster


Alignment Length:155 Identity:48/155 - (30%)
Similarity:62/155 - (40%) Gaps:31/155 - (20%)


- Green bases have known domain annotations that are detailed below.


Human   313 PLGLRSAAAA----DFPKPLVADIPGSSGVAAPPVPPPPPTPFPQAKARRKGRRGGKCSTRCFCP 373
            |.||.|..||    .|.......:.|:.|.:..|                .|..|..        
  Fly   174 PAGLHSLHAAVMGRHFGAMPTLKLGGAGGASGVP----------------SGATGSS-------- 214

Human   374 RPHAKAFACPVESCVRSFARSDELNRHLRIHTGHKPFQCRICLRNFSRSDHLTTHVRTHTGEKPF 438
            || .|.|.|  :.|.|.|.:|..|..|.|.||..:|:.|.||.:.|.|.|||..|...|:.:|||
  Fly   215 RP-KKQFIC--KYCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKDKPF 276

Human   439 ACDVCGRRFARSDEKKRHSKVHLKQ 463
            .|..||:.|.:|.....|...||::
  Fly   277 KCSDCGKGFCQSRTLAVHKVTHLEE 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EGR4NP_001956.4 Atrophin-1 <74..339 CDD:331285 9/29 (31%)
C2H2 Zn finger 382..404 CDD:275368 8/21 (38%)
COG5048 408..>466 CDD:227381 22/56 (39%)
C2H2 Zn finger 412..432 CDD:275368 9/19 (47%)
C2H2 Zn finger 440..460 CDD:275368 6/19 (32%)
oddNP_722922.1 COG5048 <203..334 CDD:227381 39/126 (31%)
C2H2 Zn finger 222..242 CDD:275368 8/21 (38%)
zf-H2C2_2 234..259 CDD:290200 10/24 (42%)
C2H2 Zn finger 250..270 CDD:275368 9/19 (47%)
zf-H2C2_2 262..285 CDD:290200 10/22 (45%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
zf-C2H2 304..326 CDD:278523
C2H2 Zn finger 306..326 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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