DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EGF and arr

DIOPT Version :10

Sequence 1:NP_001954.2 Gene:EGF / 1950 HGNCID:3229 Length:1207 Species:Homo sapiens
Sequence 2:NP_524737.2 Gene:arr / 44279 FlyBaseID:FBgn0000119 Length:1678 Species:Drosophila melanogaster


Alignment Length:818 Identity:198/818 - (24%)
Similarity:336/818 - (41%) Gaps:204/818 - (24%)


- Green bases have known domain annotations that are detailed below.


Human     5 LIILLPVVSKFSFVSLSAPQHWSCPEGTLAGNGNSTCVGPAPFLIFS--HGNSIFRI--DTEGTN 65
            |:|...:.:.:.:.::..|...|    .:|....|..|.....|:|:  |...:..|  .|.|..
  Fly    50 LLICFGISNSWQYKNVHMPSSSS----LIASPPASAFVNTPATLLFTTRHDIQVANITRPTGGPQ 110

Human    66 YEQLVVDAGVSVIMDFHYNEKRIYWVDLERQLLQRVFLNGSRQERVCNIEKNV---------SGM 121
            .:.:|.|...::.:||:|.:..:.|.|..|::::....|.|..:.:....|..         .|:
  Fly   111 IDVIVRDLAEAMAIDFYYAKNLVCWTDSGREIIECAQTNSSALQPLLRAPKQTVISTGLDKPEGL 175

Human   122 AINWINEEVIWSNQQEGIITVTDMKGNNSHILL-SALKYPANVAVDPVERFIFWS--SEVAGSLY 183
            |::|..:::.|::.::..|.|..:.|....:|. :.|..|..|||.|..:.:.|:  .|.. .:.
  Fly   176 AMDWYTDKIYWTDGEKNRIEVATLDGRYQKVLFWTDLDQPRAVAVVPARKLLIWTDWGEYP-KIE 239

Human   184 RADLDGVGVKALLETSEKI---TAVSLDVLDKRLFWIQYNREGSNSLICSCDYDGGS----VHIS 241
            ||.:||..:..:....|.:   ..:::|:.::.::|    .:|.:..|.....||.|    |:..
  Fly   240 RASMDGDPLSRMTLVKEHVFWPNGLAVDLKNELIYW----TDGKHHFIDVMRLDGSSRRTIVNNL 300

Human   242 KHPTQHNLFAMSLFGDRIFYSTWKMKTIWIANKHTGKDMVRINLHSSFVPLGELKVVHPLAQPKA 306
            |:|     |:::.:.||::::.|:                |.:|::..:...|||.:  :..|||
  Fly   301 KYP-----FSLTFYDDRLYWTDWQ----------------RGSLNALDLQTRELKEL--IDTPKA 342

Human   307 EDD--TWEP-----EQKLCKLRKGNCSSTVCGQDLQSHLCMCAEGYALSRDRKYCEDVNECAFWN 364
            .:.  .|:|     |...|....|||          ||||:.|                      
  Fly   343 PNSVRAWDPSLQPYEDNPCAHNNGNC----------SHLCLLA---------------------- 375

Human   365 HGCTLGCKNTPGSYYCTCPVGFVLLPDGKRCHQLVSCPRNVSECSHDCVLTSEGPLCFCPEGSVL 429
                   .|:.| :.|.||.|..|:                                        
  Fly   376 -------TNSQG-FSCACPTGVKLI---------------------------------------- 392

Human   430 ERDGKTCSGCSSPDNGGCSQLCVPLSPVSWECDCFPGYDLQLDEKSCAASGPQPFLLFANSQDIR 494
              ...||                                         |:|.|..:.......|.
  Fly   393 --SANTC-----------------------------------------ANGSQEMMFIVQRTQIS 414

Human   495 HMHFDGTDYGTLLSQQMGMV---YALDHDPVENKIYFAHTALKWIERANMDGSQRERLIEEGVDV 556
            .:..|..|| |:....:|.|   .|:|:||||..||::......|:||:.||:.....:...|..
  Fly   415 KISLDSPDY-TIFPLPLGKVKYAIAIDYDPVEEHIYWSDVETYTIKRAHADGTGVTDFVTSEVRH 478

Human   557 PEGLAVDWIGRRFYWTDRGKSLIGRSDLNGKRSKIITKENISQPRGIAVHPMAKRLFWTD-TGIN 620
            |:|||:||:.|..||||.....|....|:|...|::..|::.:||.|||.|....:||:| ....
  Fly   479 PDGLALDWLARNLYWTDTVTDRIEVCRLDGTARKVLIYEHLEEPRAIAVAPSLGWMFWSDWNERK 543

Human   621 PRIESSSLQGLGRLVIASSDLIWPSGITIDFLTDKLYWCDAKQSVIEMANLDGSKRRRLTQNDVG 685
            |::|.:||.|..|:|:.|.:|.||:||.:|.....:||||.|...||:||:|||.||.:..:::.
  Fly   544 PKVERASLDGSERVVLVSENLGWPNGIALDIEAKAIYWCDGKTDKIEVANMDGSGRRVVISDNLK 608

Human   686 HPFAVAVFEDYVWFSDWAMPSVMRVNKRTGKDRV-------RLQGSMLKPSSLVVVHPLAKPGAD 743
            |.|.:::.:||::::||...|:.|.:|.||.:|:       .|.|  ||.:.|..|.     |.:
  Fly   609 HLFGLSILDDYLYWTDWQRRSIDRAHKITGNNRIVVVDQYPDLMG--LKVTRLREVR-----GQN 666

Human   744 PCLYQNGGCEHICKKRLGTAWCSCREGFMKASDGKTCL 781
            .|..:||||.|:|..|.....|.|...:..|:|.:||:
  Fly   667 ACAVRNGGCSHLCLNRPRDYVCRCAIDYELANDKRTCV 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EGFNP_001954.2 TolB 47..190 CDD:440585 36/158 (23%)
LDL-receptor class B 1 86..127 9/49 (18%)
LDL-receptor class B 2 128..169 11/41 (27%)
LY 152..189 CDD:214531 11/39 (28%)
LDL-receptor class B 3 170..211 8/45 (18%)
LDL-receptor class B 4 212..258 10/49 (20%)
EGF_CA 356..395 CDD:214542 7/38 (18%)
FXa_inhibition 408..436 CDD:464251 0/27 (0%)
FXa_inhibition 439..476 CDD:464251 0/36 (0%)
LDL-receptor class B 5 483..523 11/42 (26%)
LY 505..546 CDD:214531 16/43 (37%)
LDL-receptor class B 6 524..566 14/41 (34%)
LY 547..587 CDD:214531 14/39 (36%)
LDL-receptor class B 7 567..609 16/41 (39%)
LY 590..633 CDD:214531 16/43 (37%)
LDL-receptor class B 8 610..653 17/43 (40%)
LY 635..676 CDD:214531 20/40 (50%)
LDL-receptor class B 9 654..696 16/41 (39%)
LY 677..718 CDD:214531 12/40 (30%)
FXa_inhibition 745..780 CDD:464251 12/34 (35%)
O-glycosylated at one site 801..807
EGF 835..864 CDD:394967
EGF_CA 870..910 CDD:214542
EGF_CA 912..940 CDD:429571
PHA03099 <976..>1014 CDD:165381
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1067..1093
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1108..1131
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1177..1207
arrNP_524737.2 LY 162..201 CDD:214531 6/38 (16%)
NHL 168..503 CDD:302697 100/486 (21%)
NHL repeat 172..237 CDD:271320 16/65 (25%)
LY 252..293 CDD:214531 7/44 (16%)
NHL repeat 261..298 CDD:271320 7/40 (18%)
NHL repeat 303..339 CDD:271320 10/58 (17%)
NHL repeat 341..419 CDD:271320 27/200 (14%)
NHL repeat 428..476 CDD:271320 15/47 (32%)
LY 472..511 CDD:214531 15/38 (39%)
NHL repeat 477..503 CDD:271320 12/25 (48%)
Ldl_recept_b 534..574 CDD:459654 16/39 (41%)
LY 558..599 CDD:214531 20/40 (50%)
LY 600..641 CDD:214531 12/40 (30%)
FXa_inhibition 668..703 CDD:464251 12/34 (35%)
YncE <736..886 CDD:442618
LY 776..818 CDD:214531
LY 905..946 CDD:214531
FXa_inhibition 973..1010 CDD:464251
YncE <1047..1191 CDD:442618
LDLa 1319..1362 CDD:238060
LDLa 1365..1399 CDD:238060
LDLa 1399..1433 CDD:197566
Blue background indicates that the domain is not in the aligned region.

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