DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EGF and cue

DIOPT Version :9

Sequence 1:XP_016863334.1 Gene:EGF / 1950 HGNCID:3229 Length:1223 Species:Homo sapiens
Sequence 2:NP_612113.2 Gene:cue / 38174 FlyBaseID:FBgn0011204 Length:644 Species:Drosophila melanogaster


Alignment Length:704 Identity:155/704 - (22%)
Similarity:258/704 - (36%) Gaps:199/704 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   466 SWECDCFPGYDLQLDEKSCAASGPQPFLLFANSQDIRHMHFDGTDYGTLLSQQMGMVYALDHDPV 530
            ||:......:  :.||.|.........|::.|  |::|.:              |.:::|..|.:
  Fly    47 SWQTIATAAH--EFDELSALTFDESEELIYFN--DLKHRN--------------GSIFSLKRDLI 93

Human   531 ENKIYFAHTALKWIERANMDGSQRERLIEEGVDVPEGLAVDWIGRRFYWTDRGKSLIGRSDLNGK 595
            ...    |.|.:.|.|.             |.:...|||.|.:....:|:|..:..|..:.::|.
  Fly    94 AAN----HVAEQTIART-------------GNESVGGLAYDPLNMNLFWSDTEQRKIFFAPIHGS 141

Human   596 RSKIITKENISQ---PRGIAVHPMAKRLFWTDTGI-NPRIESSSLQGLGRLVIASSDLIWPSGIT 656
            .:..:..:..::   |.|:||....::|:||::.: :|.:|..:|.|..|.||.||::..|.||.
  Fly   142 ATPQVLVDLSAEGGRPDGVAVDVCRRKLYWTNSNVTHPTVERINLDGSNRTVIISSNIDMPRGIV 206

Human   657 IDFLTDKLYWCDAKQSV---IEMANLDGSKRRRLTQNDVGHPFAVAVFEDYVWFSD------WAM 712
            :|.|:|:|:|.|..:.|   :|.:.||||.|:.:.::....|..:||..|.::::|      |:.
  Fly   207 VDQLSDRLFWIDDLKGVFFSVESSKLDGSDRQVVLKDKHHEPLNLAVTNDAIYWTDRTTRAVWSH 271

Human   713 PSVMRVNKRTGKDRVRLQGSMLKP------SSLVVVHPLAKPGADPCLYQNGGCEHICKKRLGTA 771
            |.|..:...|..          ||      .|.....|  :|.|:.|....  ..::.::..|..
  Fly   272 PKVPVIKVTTTS----------KPDEEDSTDSTDFKDP--EPVAEDCPLVR--VANLSEEARGIV 322

Human   772 WCSCREGFMKASDGKTCLALDGHQLLAGGEVDLKNQVTPLDILSKTRVSEDNIT-ESQHMLVAEI 835
               .|.||.:.      |..|.|......:|             |.||.|.:.. |.:.:|..:|
  Fly   323 ---ARTGFYQR------LQKDHHCASIVRKV-------------KERVDEQSRKFEIRSLLDQKI 365

Human   836 MVSDQDDCAPVGCSMYARCISEGE--DAT--CQCLKGFAGDGKLCSDIDECEMGVPVCPPASSKC 896
            .|.:.:           ||:::||  .||  |.|..||  .|..| :|.||.   ..|  ....|
  Fly   366 KVLEDE-----------RCMNDGEYRAATDLCICPTGF--KGSRC-EIRECH---NYC--VHGTC 411

Human   897 INTEGGY-VCRCSEGYQGDGIHCLDIDECQLGEHSCGENASCTNTEGGYTCMCAGRLSEPGLICP 960
            ..:|..| .|.|..|::|        :.|:|...|    ..|.|  ||:..:.......|...||
  Fly   412 QMSELAYPKCYCQPGFKG--------ERCELSVCS----GLCLN--GGHCRVSKDENEAPSCECP 462

Human   961 DSTPPPHLREDDHHYSVRNSDSECPLSHDGYC--LHDGVCMYIEALDKYACNCVVGYIGER---- 1019
            .........:        ||...|.|    :|  |.....||:    .:.|:.:...:.:.    
  Fly   463 AKFGGARCEQ--------NSTEICSL----FCRLLKHEPEMYV----PFGCHSICEELAQDNSTN 511

Human  1020 ---CQYRDLK-------WWELRHAGHGQQQKVIVVAVCVVVLVMLLLLSLWGAHYYRTQKLLSKN 1074
               .||:.|:       |         ....:|::.|.:|..::|:.:.:.|..  |..|     
  Fly   512 IAIPQYQHLEVCLTPRVW---------TSSVIIILVVGIVSSLLLVAVIVQGIR--RLYK----- 560

Human  1075 PKNPYEESSRDVR-------------SRRPADTED---------GMSSCPQPWF 1106
            ||.|....:..||             :.||..||.         .|:.|..|.|
  Fly   561 PKRPRIRKTFVVRKQARTNSAGDTPLTNRPLATEQCEITIENCCNMNICETPCF 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EGFXP_016863334.1 None
cueNP_612113.2 LY 101..141 CDD:214531 10/52 (19%)
Ldl_recept_b 167..208 CDD:278487 15/40 (38%)
LY 193..237 CDD:214531 19/43 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.928771 Normalized mean entropy S7221
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.760

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