DRSC/TRiP Functional Genomics Resources

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Protein Alignment EFNB2 and Ephrin

DIOPT Version :10

Sequence 1:XP_016875895.1 Gene:EFNB2 / 1948 HGNCID:3227 Length:335 Species:Homo sapiens
Sequence 2:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster


Alignment Length:230 Identity:68/230 - (29%)
Similarity:100/230 - (43%) Gaps:47/230 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    58 DKLDIICPKVDSKTV-GQYEYYKVYMVDKDQADRCTIKKENTPLLN-CAKPDQDIKFTIKFQEFS 120
            |::.||||..:..|. .:.|.|.:|.|.|.:.:.|.|...:..::. |.||.:.:.|||.|:.|:
  Fly   249 DQVHIICPVYEPGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICDKPQKLMFFTITFRPFT 313

Human   121 PNLWGLEFQKNKDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASSAGSTRNKDPTRRP 185
            |...||||....|||.||||  |.:.|..:.||.|.|..||::.||    ..|....||      
  Fly   314 PQPGGLEFLPGNDYYFISTS--SKDDLYRRIGGRCSTNNMKVVFKV----CCAPEDNNK------ 366

Human   186 ELEAGTNGRSST-TSPFVKPNPGSSTDGNSAGHSGNNILGSEVALFAGIASGCIIFIVIIITLVV 249
             ..|.:|.:|.| |...:..|..::.:.:...|..|..:|:.:    ||..|.||          
  Fly   367 -TTALSNSKSVTDTGGAINVNIANNDESHVNSHGNNIAIGTNI----GINGGQII---------- 416

Human   250 LLLKYRRRHRKHSPQHTTTLSLSTLATPKRSGNNN 284
                       ..|| :..:.::.|     |||||
  Fly   417 -----------GGPQ-SAGIPINPL-----SGNNN 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EFNB2XP_016875895.1 Ephrin-B_Ectodomain 43..167 CDD:259897 42/110 (38%)
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 43/114 (38%)

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