DRSC/TRiP Functional Genomics Resources

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Protein Alignment EFNA3 and Ephrin

DIOPT Version :9

Sequence 1:NP_004943.1 Gene:EFNA3 / 1944 HGNCID:3223 Length:238 Species:Homo sapiens
Sequence 2:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster


Alignment Length:221 Identity:56/221 - (25%)
Similarity:92/221 - (41%) Gaps:52/221 - (23%)


- Green bases have known domain annotations that are detailed below.


Human     7 LLLLLLVPVPLLPLLAQGPGGALGNRHAVYWNSSNQHLRREGYTVQVNVN--------DYLDIYC 63
            ||.|:.:...||..::     :......::||:||...|.:.....::||        |.:.|.|
  Fly   196 LLTLICMETVLLSTMS-----SCAKTFYMHWNTSNSIFRIDNTDHIIDVNKGNLAFEFDQVHIIC 255

Human    64 PHYNSSGVGPGAGPGPG---GGAEQYVLYMVSRNGYRTCNASQGFKR--WECNRPHAPHSPIKFS 123
            |.|.           ||   ...|:|::|.||:..|.||..:....|  ..|::   |...:.|:
  Fly   256 PVYE-----------PGTFENETEKYIIYNVSKVEYETCRITNADPRVIAICDK---PQKLMFFT 306

Human   124 EKFQRYSAFSLGYEFHAGHEYYYISTPT-----HNLHWKCL--RMKVF--VCCA------STSHS 173
            ..|:.::....|.||..|::||:|||.:     ..:..:|.  .|||.  ||||      :|:.|
  Fly   307 ITFRPFTPQPGGLEFLPGNDYYFISTSSKDDLYRRIGGRCSTNNMKVVFKVCCAPEDNNKTTALS 371

Human   174 GEKPVPTLPQFTMGPNVKINVLEDFE 199
            ..|.|.     ..|..:.:|:..:.|
  Fly   372 NSKSVT-----DTGGAINVNIANNDE 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EFNA3NP_004943.1 Ephrin-A_Ectodomain 31..166 CDD:259896 40/156 (26%)
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 40/154 (26%)
PigN <557..>622 CDD:282796
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165153158
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3858
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11304
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.840

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