DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EFNA2 and Ephrin

DIOPT Version :9

Sequence 1:XP_016881938.1 Gene:EFNA2 / 1943 HGNCID:3222 Length:298 Species:Homo sapiens
Sequence 2:NP_651927.1 Gene:Ephrin / 43799 FlyBaseID:FBgn0040324 Length:652 Species:Drosophila melanogaster


Alignment Length:93 Identity:29/93 - (31%)
Similarity:44/93 - (47%) Gaps:13/93 - (13%)


- Green bases have known domain annotations that are detailed below.


Human   152 DYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASC-----DHRQRGFKRWECNRPAAPGGPLKF 211
            |.:.|.||.| .|.......|.|::|.|:...:.:|     |.|....    |::|..   .:.|
  Fly   249 DQVHIICPVY-EPGTFENETEKYIIYNVSKVEYETCRITNADPRVIAI----CDKPQK---LMFF 305

Human   212 SEKFQLFTPFSLGFEFRPGHEYYYISAT 239
            :..|:.|||...|.||.||::||:||.:
  Fly   306 TITFRPFTPQPGGLEFLPGNDYYFISTS 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EFNA2XP_016881938.1 None
EphrinNP_651927.1 Ephrin_ectodomain 217..358 CDD:259861 29/93 (31%)
PigN <557..>622 CDD:282796
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165153157
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3858
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11304
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.