| Sequence 1: | NP_001116430.1 | Gene: | Rad54l / 19366 | MGIID: | 894697 | Length: | 747 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_476661.1 | Gene: | okr / 33507 | FlyBaseID: | FBgn0002989 | Length: | 784 | Species: | Drosophila melanogaster |
| Alignment Length: | 760 | Identity: | 423/760 - (55%) |
|---|---|---|---|
| Similarity: | 551/760 - (72%) | Gaps: | 32/760 - (4%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 1 MRRSLAPSQLARRKPEDRSSDDEDWQPGTVTP---KKRKSSSETQVQ-ECFLSPFRKPLTQLLNR 61
Mouse 62 PPCLD---------SSQHEAFIRSILSKPFKVPIPNYQGPL-GSRALGLKRAGVRRALHDPLEEG 116
Mouse 117 ALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGS-HGCI 180
Mouse 181 MADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDG 245
Mouse 246 GSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVGVLKKGNVGLVICDEGHRLKNSENQTYQ 310
Mouse 311 ALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQ 375
Mouse 376 RGEERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELRE- 439
Mouse 440 -GKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDGFEGTLGIFPPGYNSKAVEPQLSGKMLVLDY 503
Mouse 504 ILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFV 568
Mouse 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQ 633
Mouse 634 RQSHKKALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSD 698
Mouse 699 CTSDLAQWNHSTDKRGLQDEVLQAAWDASSTAITFVFHQRSHEEQ 743 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rad54l | NP_001116430.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..42 | 19/43 (44%) | |
| Required for chromatin remodeling, strand pairing activities and coupling of ATPase activity. /evidence=ECO:0000250 | 2..9 | 6/6 (100%) | |||
| Rad54_N | <76..>123 | CDD:370043 | 22/47 (47%) | ||
| HepA | <107..668 | CDD:223627 | 345/563 (61%) | ||
| DEXHc_RAD54A | 153..395 | CDD:350825 | 150/242 (62%) | ||
| DEGH box | 296..299 | 2/2 (100%) | |||
| okr | NP_476661.1 | SNF2_N | 159..466 | CDD:278600 | 181/309 (59%) |
| DEXDc | 179..328 | CDD:238005 | 98/149 (66%) | ||
| HELICc | 493..622 | CDD:238034 | 98/128 (77%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167836433 | |
| Domainoid | 1 | 1.000 | 344 | 1.000 | Domainoid score | I1059 |
| eggNOG | 1 | 0.900 | - | - | E2759_KOG0390 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H48227 | |
| Inparanoid | 1 | 1.050 | 826 | 1.000 | Inparanoid score | I463 |
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S723 |
| OMA | 1 | 1.010 | - | - | QHG58624 | |
| OrthoDB | 1 | 1.010 | - | - | D93727at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001533 | |
| OrthoInspector | 1 | 1.000 | - | - | oto93025 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102456 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR45629 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1064 |
| SonicParanoid | 1 | 1.000 | - | - | X3107 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 18 | 17.750 | |||||