DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab11b and Rab14

DIOPT Version :10

Sequence 1:XP_030105459.1 Gene:Rab11b / 19326 MGIID:99425 Length:278 Species:Mus musculus
Sequence 2:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster


Alignment Length:167 Identity:86/167 - (51%)
Similarity:115/167 - (68%) Gaps:0/167 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse    75 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSA 139
            ::|||.|||||.||.:||..:|......||||||.||.|:||.|.||.||||||||||:||:|.:
  Fly    39 IIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTAGQERFRAVTRS 103

Mouse   140 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAE 204
            |||||.|||:||||.:..||.::..||.:.|:..:.:.||.|:||||||...|.|..:||:.||:
  Fly   104 YYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTREVTYEEAKEFAD 168

Mouse   205 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 241
            :|.|.|:|.||:...||||||.....:||:.:.:.::
  Fly   169 ENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRL 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab11bXP_030105459.1 Rab11_like 74..233 CDD:206660 84/157 (54%)
Rab14NP_788056.1 Rab14 34..199 CDD:133322 86/159 (54%)

Return to query results.
Submit another query.