DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab1a and Rab14

DIOPT Version :10

Sequence 1:NP_033022.1 Gene:Rab1a / 19324 MGIID:97842 Length:205 Species:Mus musculus
Sequence 2:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster


Alignment Length:201 Identity:90/201 - (44%)
Similarity:128/201 - (63%) Gaps:1/201 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIW 65
            |::....|:|:||.::|||.||||||||.:|.:..:..:...||||:|..|.||:|.|.||||||
  Fly    25 MTAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIW 89

Mouse    66 DTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTT 130
            |||||||||.:|.||||||.|.::|||:|.:.::|::..||.:.....:.:....|:|||.||.:
  Fly    90 DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLES 154

Mouse   131 KKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQ-S 194
            .:.|.|..||||||..|:.|||.||....|||::|:..|.:|.:.:..|.....|.:|.|:.: |
  Fly   155 TREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNASESGVQHRPS 219

Mouse   195 TPVKQS 200
            .|.:.|
  Fly   220 QPSRTS 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab1aNP_033022.1 Rab1_Ypt1 10..175 CDD:206661 81/164 (49%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 34..48 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 66..83 13/16 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..205 7/24 (29%)
Rab14NP_788056.1 Rab14 34..199 CDD:133322 81/164 (49%)

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