DRSC/TRiP Functional Genomics Resources

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Protein Alignment Qk and qkr58E-3

DIOPT Version :9

Sequence 1:NP_001152989.1 Gene:Qk / 19317 MGIID:97837 Length:341 Species:Mus musculus
Sequence 2:NP_001246460.1 Gene:qkr58E-3 / 37559 FlyBaseID:FBgn0022984 Length:317 Species:Drosophila melanogaster


Alignment Length:325 Identity:89/325 - (27%)
Similarity:141/325 - (43%) Gaps:72/325 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse     5 MET----KEKPKPTPD-----------YLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRV-- 52
            |||    .||..||.|           :|..|..:::.:|:....|.:      |:||.:.||  
  Fly     1 METPSEFTEKQPPTHDHQPRLNEVAQKFLADLDEERQRLSADFPLCAL------LIDEAVDRVYC 59

Mouse    53 -----RKDMYNDTLNGSTEKRSAELPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQ 112
                 .|:.|.|.......|              :.:|::||||:||.|||.|:||||:|.:.::
  Fly    60 TGRIPGKEFYADVYKQKPMK--------------ITQKVFVPVKQYPKFNFTGKILGPKGNSLRR 110

Mouse   113 LEAETGCKIMVRGKGSMRDKKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEV 175
            |:.||.|||.::|:.|:||:.||||.|  |.|.:.||.:||.:.::..........::..|:.|:
  Fly   111 LQEETQCKIAIKGRSSIRDRNKEEQLRSTGDPRYAHLQKDLFLEVSTVATPAECYARIAYALAEI 175

Mouse   176 KKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPAL-AF------SLAATAQAAPRIITGPA 233
            :|.|:|  :..|.:...||.||..:: .....||..|.| |:      .....:..||:.|.   
  Fly   176 RKYLIP--DKNDEVSHEQLRELMEMD-PESAKNIHGPNLEAYRSVFDKKFGGNSNGAPKYIN--- 234

Mouse   234 PVLPPAALRTPTPAGPTIMPLIRQIQTAVMPNGTP------HPTAAIVPPGPEAGLIYTPYEYPY 292
              |...|...| |....:..:..:.:..:.|...|      .|..:|:|....|      |:.||
  Fly   235 --LIKRAAENP-PEVDDVEEVAYEYEHRMPPKRPPTGYEYSKPRPSIIPTNAAA------YKRPY 290

Mouse   293  292
              Fly   291  290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
QkNP_001152989.1 STAR_dimer 10..66 CDD:406848 16/73 (22%)
Qua1 domain, involved in homodimerization. /evidence=ECO:0000250|UniProtKB:Q17339 11..82 16/88 (18%)
KH-I_Hqk 81..183 CDD:411893 42/103 (41%)
Qua2 domain, involved in RNA binding. /evidence=ECO:0000250|UniProtKB:Q96PU8 182..213 7/30 (23%)
PHA03247 <211..314 CDD:223021 19/95 (20%)
SH3-binding 276..279 1/2 (50%)
Quaking_NLS 312..341 CDD:406855
Nuclear localization signal 324..330
qkr58E-3NP_001246460.1 SF1_like-KH 81..200 CDD:239088 47/121 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845502
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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